GEO Browser - GEO

Series

Samples

Platforms

DataSets

32 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					SRA Run Selector	Christopher Benner
GSE60434	Hypoxia-induced TET-TNFa-p38-MAPK signaling axis drives tumor malignancy of human breast cancer	Methylation profiling by high throughput sequencing	Homo sapiens	2	BIGWIG SRA Run Selector	Christopher Benner	Oct 05, 2015
GSE62387	In vivo activation of a conserved microRNA program induces robust mammalian heart regeneration (RNA-Seq)	Expression profiling by high throughput sequencing	Rattus norvegicus	2	TXT SRA Run Selector	Christopher Benner	Nov 20, 2014
GSE72670	New roles for DNA cytosine modification, eRNA, anchors and super-anchors in developing B cell progenitors	Methylation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Christopher Benner	Sep 28, 2015
GSE63568	An alternative pluripotent state confers interspecies chimaeric competency [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	TSV SRA Run Selector	Christopher Benner	May 06, 2015
GSE68645	The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (RNA-seq)	Expression profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Christopher Benner	Jun 24, 2015
GSE68677	Characterization of the TCT motif reveals a crucial role of the core promoter micro-environment in gene regulation	Other	Drosophila melanogaster	4	BED TXT SRA Run Selector	Christopher Benner	Jan 01, 2017
GSE77129	Wiskott-Aldrich Syndrome-causative mutations disrupt alternative splicing and promote gene networks predisposed to hematologic malignancies	Expression profiling by high throughput sequencing	Homo sapiens	5	TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE83108	Nascent RNA sequencing reveals distinct features in Plant transcription	Expression profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT SRA Run Selector	Christopher Benner	Oct 06, 2016
GSE54968	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Christopher Benner	May 15, 2015
GSE145294	MCUb upregulation in the type 2 diabetic heart impacts cardiac function by altering mitochondrial metabolic fuel flux and the cardiac myocyte phosphoproteome	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Christopher Benner	Dec 15, 2022
GSE57272	Conserved non-coding sequence 2 (CNS2) of the Foxp3 genomic locus is essential for the function and stability of regulatory T cells during their activation	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Sep 04, 2014
GSE60857	Coordinate Regulation of Enhancer Transcription at Super-Enhancers	Expression profiling by high throughput sequencing Other	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Dec 25, 2014
GSE68647	The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED SRA Run Selector	Christopher Benner	Jun 24, 2015
GSE69932	Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BED TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE60604	An alternative pluripotent state confers interspecies chimaeric competency [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BIGWIG SRA Run Selector	Christopher Benner	May 06, 2015
GSE66457	Mutational blows to Sox2+ cells induce epithelial squamous tumor initiation	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Christopher Benner	Jan 01, 2017
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14	TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE47626	Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Pan paniscus Pan troglodytes	18	TXT SRA Run Selector	Christopher Benner	Oct 23, 2013
GSE40173	Global changes in the nuclear positioning of chromatin domains and genomic interactions that orchestrate B cell fate	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BEDGRAPH TXT SRA Run Selector	Christopher Benner	Oct 09, 2012
GSE64008	Nucleoporin Nup153 Regulates Stem Cell Pluripotency through Gene Silencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED TXT SRA Run Selector	Christopher Benner	Jun 19, 2015