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15647 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
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GSE154280	“Reprogram enablement” as an assay for identifying pivotal early oncogenic pathways by their ability to allow neoplastic cells to reacquire a normal epiblast-emulating state: evidence from human thyroid cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	10	BW TXT XLSX SRA Run Selector	Ryan C. Gimple	Aug 13, 2020
GSE95032	‘Placeholder’ nucleosomes underlie germline-to-embryo DNA methylation reprogramming [RRBS]	Methylation profiling by high throughput sequencing	Danio rerio	25	BW SRA Run Selector	Patrick Murphy	Dec 12, 2017
GSE95030	‘Placeholder’ nucleosomes underlie germline-to-embryo DNA methylation reprogramming [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	49	BED BW SRA Run Selector	Patrick Murphy	Dec 12, 2017
GSE285205	‘Digital Reprogramming’ Decodes Epigenetic Barriers of Cell Fate Changes and Identifies p300 Inhibitors as Facilitators [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis	94	BW	Eva Hoermanseder	Jan 22, 2025
GSE285202	‘Digital Reprogramming’ Decodes Epigenetic Barriers of Cell Fate Changes and Identifies p300 Inhibitors as Facilitators [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis	16	BW	Eva Hoermanseder	Jan 22, 2025
GSE127960	β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	57	BW SRA Run Selector	Ali Shilatifard	Aug 20, 2019
GSE140340	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus [GRO-seq]	Other	Mus musculus	6	BW SRA Run Selector	Yiwei Lai	Jul 01, 2020
GSE123690	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Yiwei Lai	Jul 01, 2020
GSE123692	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW TXT	Yiwei Lai	Jul 01, 2020
GSE205258	β-catenin programs a tissue-specific epigenetic vulnerability in aggressive adrenocortical carcinoma (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	11	BW TXT	Antonio Marcondes Lerario	Apr 25, 2023
GSE205254	β-catenin programs a tissue-specific epigenetic vulnerability in aggressive adrenocortical carcinoma (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW NARROWPEAK	Antonio Marcondes Lerario	Apr 25, 2023
GSE205283	β-catenin programs a tissue-specific epigenetic vulnerability in aggressive adrenocortical carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Drosophila melanogaster Homo sapiens	48	BW IDAT TXT	Antonio Marcondes Lerario	Apr 25, 2023
GSE108620	β-catenin associated protein complex maintains ground state mouse embryonic stem cell by regulating lineage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW CSV SRA Run Selector	Shiyuan (Cynthia) Chen	Aug 20, 2020
GSE196986	β-catenin activity induces an RNA biosynthesis program promoting therapy resistance in T Acute Lymphoblastic Leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	35	BIGWIG BW TXT	Anna Bigas	Dec 12, 2022
GSE157972	β-carotene conversion to vitamin A delays atherosclerosis progression by decreasing hepatic lipid secretion in mice	Expression profiling by high throughput sequencing	Mus musculus	8	BW TXT SRA Run Selector	Alireza Khodadadi-Jamayran	Nov 12, 2020
GSE158252	β-Globin Lentiviral Vectors Have Reduced Titers Due to Incomplete Vector RNA Genomes and Lowered Virion Production	Expression profiling by high throughput sequencing	synthetic construct	9	BW FASTA SRA Run Selector	Feiyang Ma	Sep 21, 2020
GSE221723	αKG-driven RNA polymerase II transcription of cyclin D1 licenses malic enzyme 2 to promote cell cycle progression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BW XLS	zhenxi zhang	Jun 25, 2023
GSE158344	De novo DNA methylation suppresses aberrant fate trajectory during epiblast transition [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW SRA Run Selector	Irina Mohorianu	Sep 01, 2021
GSE128233	yongqianghou_data	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	18	BW TXT	Yongqiang Hou	Mar 12, 2020
GSE230275	yHSC AThi oHSC ATlo oHSC ATAC-Seq - Differences in Chromatin Accessibility in Autophagy engaging vs non-autophagy engaging old hematopoeitic stem cells (HSC) comapred to young HSC.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW CSV NARROWPEAK	Paul Vincent Dellorusso	May 15, 2024