GEO Browser - GEO

Series

Samples

Platforms

DataSets

3672 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247				SRA Run Selector
GSE218881	Nanowell-based single-cell combinatorial indexed ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	ARROW BED SRA Run Selector	Andrew Adey	Feb 08, 2023
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE173224	Full-length dystrophin restoration via targeted genomic integration by AAV-CRISPR in a humanized mouse model of Duchenne muscular dystrophy	Other	Mus musculus	186	BAM TXT SRA Run Selector	Adrian Oliver	Apr 24, 2021
GSE156528	Genome-wide maps of gV sPLA2 binding sites in Raw 264.7 cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BB BW TXT SRA Run Selector	Daisuke Fujioka	Mar 26, 2021
GSE167539	Mammalian SWI/SNF chromatin remodeler is essential for reductional meiosis in males	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BB BED BW SRA Run Selector	Terry Magnuson	Oct 11, 2021
GSE90536	Foxa and Hnf4alpha targets during conversion from mouse embryonic fibroblasts (MEFs) to hepatocyte-like (iHep) cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BW SRA Run Selector	Atsushi Suzuki	Aug 06, 2020
GSE90538	Foxa and Hnf4alpha targets during conversion from mouse embryonic fibroblasts (MEFs) to hepatocyte-like (iHep) cells and hepatocytes (Hep).	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BW SRA Run Selector	Atsushi Suzuki	Aug 06, 2020
GSE114981	Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	66	BED TXT SRA Run Selector	Huacheng Luo	Dec 03, 2019
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Huacheng Luo	Jan 27, 2021
GSE117332	Targets of DNA binding, N-terminal, or C-terminal domain swapped mutant forms fo Foxa proteins in induced hepatocyte-like (iHep) cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED BW SRA Run Selector	Atsushi Suzuki	Aug 06, 2020
GSE119306	Aberrant chromatin landscape upon loss of the H3.3 chaperone Daxx leads to Pu.1-mediated neutrophilia and inflammation [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED NARROWPEAK TXT SRA Run Selector	Paolo Salomoni	Aug 31, 2021
GSE119880	Targets of Hnf4alpha during conversion from mouse embryonic fibroblasts (MEFs) to hepatocyte-like (iHep) cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW SRA Run Selector	Atsushi Suzuki	Aug 06, 2020
GSE123651	CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BED BW SRA Run Selector	ya wei song	Apr 05, 2022
GSE123667	CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	BED BW SRA Run Selector	ya wei song	Apr 05, 2022
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125203	Chromatin accessibility landscape upon induction of Msgn1, Pax3 and Myf5 in mesodermal cells and identification of conserved Pax3 binding sites and target genes during skeletal myogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	65	BED XLSX SRA Run Selector	Alessandro Magli	Feb 26, 2019
GSE126362	Pax3 cooperates with Ldb1 to direct local chromosome architecture during lineage specification	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	60	BED HIC SRA Run Selector	Alessandro Magli	Apr 16, 2019
GSE126958	Genome-wide methyl-cytosine competition by DNMT and TET	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BED TXT SRA Run Selector	Jocelyn Charlton	Apr 21, 2020