GEO Browser - GEO

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108 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247				BROADPEAK
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE160654	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	12	BEDGRAPH BROADPEAK NARROWPEAK SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020
GSE160657	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	28	BED BEDGRAPH BROADPEAK NARROWPEAK TXT	Giuliano Crispatzu	Dec 31, 2020
GSE152663	SWI/SNF inactivation in the endometrial epithelium leads to loss of epithelial integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BROADPEAK TAB	Ronald L. Chandler	Oct 20, 2020
GSE159042	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED BROADPEAK BW SRA Run Selector	Falong Lu	Jun 27, 2022
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE183674	Pancreas agenesis mutations disrupt a lead enhancer controlling a developmental enhancer cluster	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	BROADPEAK BW NARROWPEAK	Irene Miguel-Escalada	Jun 30, 2022
GSE210119	Cooperative ETS Transcription Factors Enforce Adult Endothelial Cell Fate and Cardiovascular Homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	62	BROADPEAK CSV	Sean Houghton	Oct 17, 2022
GSE217639	Effect of ZIC1 on group 3 medulloblastoma cell lines and granule neuron progenitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	49	BROADPEAK NARROWPEAK	Michael D Taylor	Sep 19, 2024
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE234699	SMYD5 is a regulator of the mild hypothermia response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	127	BEDGRAPH BROADPEAK BW H5	Hans Tomas Bjornsson	Jul 26, 2024
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE241444	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	129	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 13, 2023
GSE254601	Dynamic Single Cell Transcriptomics Defines Kidney FGF23/KL Bioactivity and Novel Segment-Specific Inflammatory Targets	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	4	BROADPEAK MTX TSV	Kenneth White	Mar 28, 2025
GSE255808	Transcriptional and epigenetic rewiring by the NUP98::KDM5A fusion oncoprotein directly activates CDK12	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BROADPEAK BW CSV NARROWPEAK	Thomas Eder	Feb 17, 2025
GSE261536	BPDCN MYB Fusions Regulate Cell Cycle Genes, Impair Differentiation and Induce Myeloid-Dendritic Cell Leukemia	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	124	BROADPEAK BW NARROWPEAK	Christopher Booth	Nov 15, 2024
GSE266956	Increased translation driven by a non-canonical EZH2 cistrome creates a synthetic vulnerability in enzalutamide-resistant prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BROADPEAK BW NARROWPEAK	Jorge Moscat	Oct 22, 2024
GSE269959	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates chromatin state and leukemogenesis [seq_DNA-CUTandTag]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BROADPEAK	Xiaoyang Dou	Jul 25, 2024
GSE270432	Bidirectional histone monoaminylation dynamics regulate neural rhythmicity	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	123	BROADPEAK BW NARROWPEAK	Benjamin H Weekley	Oct 10, 2024
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020