GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417				WIG
GSE234295	Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	124	MCOOL WIG	Dirk Schuebeler	Mar 11, 2024
GSE236182	Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37	BEDGRAPH BEDPE BIGWIG BW HIC TXT WIG	Sergio Niñerola	Dec 04, 2023
GSE197404	Combinatorial effects on gene expression at the Lbx1/Fgf8 locus resolve Split-Hand/Foot Malformation type 3	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BEDGRAPH WIG	Giulia Cova	Feb 22, 2023
GSE162476	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, ASPL_VCP_Pol2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BW WIG SRA Run Selector	Jinxiu Li	Jan 01, 2023
GSE162609	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	185	BEDPE BW WIG	Jinxiu Li	Jan 01, 2023
GSE155140	Genetic dissection of a super enhancer controlling the Nppa-Nppb cluster in the heart of RE3 mutants	Other	Mus musculus	12	WIG SRA Run Selector	Vincent M. Christoffels	Jul 30, 2021
GSE158708	Genetic dissection of a super enhancer controlling the Nppa-Nppb cluster in the heart after cardiac stress	Other	Mus musculus	9	WIG SRA Run Selector	Vincent M. Christoffels	Jul 30, 2021
GSE158735	Genetic dissection of a super enhancer controlling the Nppa-Nppb cluster in the heart	Other	Mus musculus	21	WIG	Vincent M. Christoffels	Jul 30, 2021
GSE138135	Igk locus capture-based target enrichment sequencing	Other	Mus musculus	3	WIG SRA Run Selector	Ludovic Deriano	Aug 24, 2020
GSE138136	High-throughput capture of cis-rearrangement and trans-rearrangement sequence [LAM-HTGTS]	Other	Mus musculus	32	WIG SRA Run Selector	Ludovic Deriano	Aug 24, 2020
GSE138137	High-throughput sequencing of RAG induced re-arrangements	Other	Mus musculus	35	WIG	Ludovic Deriano	Aug 24, 2020
GSE134020	Mammalian RNA decay pathways are highly specialized and widely linked to translation	Expression profiling by high throughput sequencing Other	Mus musculus	183	BIGWIG TXT WIG SRA Run Selector	Alex Charles Tuck	Jan 29, 2020
GSE131154	Fidelity of translation initiation is required for coordinated respiratory complex assembly	Expression profiling by high throughput sequencing Other	Mus musculus	8	BED WIG SRA Run Selector	Stefan J Siira	Jan 13, 2020
GSE121118	Expression profile (nanoCAGE-seq), chromatin accessibility (ATAC-seq) profile, and histone modification profile (ChIP-seq for H3K4me3, H3K9me3, and H3K27me3) during the course of mouse gonocyte development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	H5 TXT WIG SRA Run Selector	Haruhiko Siomi	Aug 29, 2019
GSE102253	The role of TEFM in mitochondrial gene expression [smallRNA]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	7	TXT WIG SRA Run Selector	Stefan J Siira	Apr 01, 2019
GSE102254	The role of TEFM in mitochondrial gene expression [TruSeq]	Expression profiling by high throughput sequencing	Mus musculus	8	TXT WIG SRA Run Selector	Stefan J Siira	Apr 01, 2019
GSE102255	The role of TEFM in mitochondrial gene expression	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	15	TXT WIG	Stefan J Siira	Apr 01, 2019
GSE116704	CG dinucleotides enhance promoter activity independent of DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	186	TAB WIG SRA Run Selector	Dirk Schuebeler	Jan 20, 2019
GSE69887	PAR-TERRA RNA directs homologous sex chromosome pairing	Other Expression profiling by high throughput sequencing	Mus musculus	25	BW WIG SRA Run Selector	Hsueh-Ping Chu	Jul 10, 2017
GSE97871	Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	88	BW WIG	Jelena M Telenius	Jun 14, 2017