GEO Browser - GEO

Series

Samples

Platforms

DataSets

95 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417				BW
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201	BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE162609	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	185	BEDPE BW WIG	Jinxiu Li	Jan 01, 2023
GSE162476	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, ASPL_VCP_Pol2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BW WIG SRA Run Selector	Jinxiu Li	Jan 01, 2023
GSE210317	Active DNA demethylation promotes cell fate specification and the DNA damage response	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	121	BW TXT	Wei Wu	Dec 01, 2022
GSE140105	AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq)	Non-coding RNA profiling by high throughput sequencing	Mus musculus	76	BW	Todd Lowe	Nov 08, 2019
GSE140094	AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [Thymus]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Todd Lowe	Nov 08, 2019
GSE140097	AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [kidney]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Todd Lowe	Nov 08, 2019
GSE140096	AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [liver]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	10	BW SRA Run Selector	Todd Lowe	Nov 08, 2019
GSE143271	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	BED BROADPEAK BW TSV	Ross Hardison	Jan 08, 2020
GSE143266	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BROADPEAK BW SRA Run Selector	Ross Hardison	Jan 09, 2020
GSE126264	Bcor loss perturbs myeloid differentiation and promotes leukaemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	47	BW NARROWPEAK TDF	Madison Kelly	Feb 07, 2019
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE110604	Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BED BW	Jerome Menet	May 08, 2018
GSE119148	Chromatin Conformation Dynamics are essential to Control the Transcription of INK4/ARF locus	Other	Homo sapiens Mus musculus	16	BW SRA Run Selector	Chunliang Li	Aug 01, 2024
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE193733	Clonal lineage tracing reveals shared origin of conventional and plasmacytoid dendritic cells	Expression profiling by high throughput sequencing Other	Mus musculus	112	BW MTX TSV TXT	Alireza Khodadadi-Jamayran	Feb 16, 2022
GSE230605	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination	Expression profiling by high throughput sequencing Other	Mus musculus	132	BEDGRAPH BW TXT	Frederick Alt	May 30, 2023