GEO Browser - GEO

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63 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417				BEDGRAPH
GSE147828	miRNA profiling of mouse motor neuron during development	Non-coding RNA profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH SRA Run Selector	Joye Li	Dec 01, 2022
GSE71154	m6A-CLIP identified major presence of m6A in last exons	Other	Homo sapiens Mus musculus	8	BED BEDGRAPH TXT SRA Run Selector	Shengdong Ke	Sep 28, 2015
GSE151747	eiCLIP analysis of RBFOX2 in primary mouse hepatocytes	Expression profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	LMS Bioinformatics Core	Sep 26, 2022
GSE190979	YTHDC2 CLIP	Other	Mus musculus	18	BEDGRAPH	Yuhki Saito	Jan 20, 2022
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Mortiz M Gaidt	Jul 01, 2020
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE116784	Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH SRA Run Selector	Shinichiro Chuma	Feb 06, 2020
GSE139677	Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Shinichiro Chuma	Feb 06, 2020
GSE116798	Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BEDGRAPH FPKM_TRACKING	Shinichiro Chuma	Feb 06, 2020
GSE242974	The role of SMC3 in heart development by regulating super-enhancer associated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BED BEDGRAPH BW MTX TSV XLS XLSX	bowen zhang	Sep 14, 2023
GSE130214	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [3C-HTGTS]	Genome variation profiling by high throughput sequencing Other	Mus musculus	19	BEDGRAPH SRA Run Selector	Frederick W Alt	Aug 19, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE181609	Telomere-specific chromatin capture using a pyrrole–imidazole polyamide probe for the identification of proteins and non-coding	Other	Homo sapiens Mus musculus	24	BEDGRAPH TXT	Satoru Ide	Oct 10, 2021
GSE95826	Tcrd rearrangement redirects a processive Tcra recombination program to expand the Tcra repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH TXT SRA Run Selector	Zachary Carico	Jun 06, 2017
GSE86964	Target enrichment followed by high throughput sequencing of telomeric DDRNAs in telomere-deprotected mouse cells	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH FA SRA Run Selector	Fabrizio d'Adda di Fagagna	May 10, 2017
GSE178230	Screening thousands of transcribed coding and non-coding regions reveals sequence determinants of RNA polymerase II elongation potential.	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BEDGRAPH BW FA TXT SRA Run Selector	Hanneke Vlaming	Apr 06, 2022
GSE212553	Roles of NOVA1 in inhibitory neurons	Expression profiling by high throughput sequencing	Mus musculus	65	BEDGRAPH TXT	Yoko Tajima	Aug 15, 2024
GSE160328	RNMT regulates the CD4 T cell transcriptome and translatome	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	46	BED BEDGRAPH TAB	Alison Galloway	May 13, 2021
GSE103248	RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH TXT	Masato Yano	Dec 08, 2017
GSE103247	Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH SRA Run Selector	Masato Yano	Dec 08, 2017