GEO Browser - GEO

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63 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417				BEDGRAPH
GSE58339	A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential	Expression profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH SRA Run Selector	Jennifer Mitchell	Nov 19, 2014
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201	BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE142677	AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity	Other Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH CSV SRA Run Selector	Sean O'Connor	Dec 28, 2019
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE142778	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [3C-HTGTS]	Other	Mus musculus	24	BEDGRAPH SRA Run Selector	Frederick W Alt	May 11, 2020
GSE113023	CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning	Other	Mus musculus	78	BEDGRAPH TXT	Suvi Jain	Jul 03, 2018
GSE113022	CTCF-Binding Elements Mediate Accessibility of RAG Substrates During Chromatin Scanning [dataset 3]	Other	Mus musculus	35	BEDGRAPH SRA Run Selector	Suvi Jain	Jul 03, 2018
GSE128579	Cas9/sgRNA selective targeting of the P23H Rhodopsin mutant allele for treating retinitis pigmentosa by intravitreal AAV9.PHP.B-based delivery	Other	Mus musculus	6	BEDGRAPH SRA Run Selector	Luca Massimino	Mar 20, 2019
GSE120666	Characterisation by Next generation Capture-C of Pax6 locus in three mouse cell lines (MV+, RAG and β-TC3 cells).	Other	Mus musculus	20	BED BEDGRAPH TXT SRA Run Selector	nick gilbert	Oct 18, 2018
GSE151753	Characterization of the role of RBFOX2 in the liver	Expression profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH	LMS Bioinformatics Core	Sep 26, 2022
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE130263	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [3C-HTGTS]	Genome variation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE254620	Chromatin conformation capture (4C-seq) from mouse liver	Other	Mus musculus	48	BEDGRAPH	LORENA AGUILAR ARNAL	Aug 01, 2024
GSE94030	Circularized RNA sequencing of wild-type and Mrpp3 knock out mouse heart mitochondria	Other	Mus musculus	8	BEDGRAPH SRA Run Selector	Stefan J Siira	Mar 23, 2017
GSE97148	Clonally stable Vκ allelic choice instructs Igκ repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BEDGRAPH TXT SRA Run Selector	Yehudit Bergman	Apr 01, 2017
GSE197404	Combinatorial effects on gene expression at the Lbx1/Fgf8 locus resolve Split-Hand/Foot Malformation type 3	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BEDGRAPH WIG	Giulia Cova	Feb 22, 2023
GSE230605	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination	Expression profiling by high throughput sequencing Other	Mus musculus	132	BEDGRAPH BW TXT	Frederick Alt	May 30, 2023
GSE230604	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination [3C_HTGTS_Seq]	Other	Mus musculus	99	BEDGRAPH	Frederick Alt	May 30, 2023
GSE282522	Development of a potent epigenetic editor targeting human PCSK9 with durable reduction of cholesterol in mice and non-human primates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca fascicularis Mus musculus	96	BEDGRAPH RESULTS	Frederic Tremblay	Feb 04, 2025