Complete genomes: Nidovirales
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Viruses   Riboviria  
  Nidovirales - 107 complete genomes
Arnidovirineae  [21] Cornidovirineae  [54] Mesnidovirineae  [13] Monidovirineae  [1]
Ronidovirineae  [5] Tornidovirineae  [11] unclassified Nidovirales  [2]
* The list view for each taxonomy node shows only the next level of sublineages.
* Unclassified/unassigned names are written in copper

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Genome Accession RefSeq type Source information Segm Length  Protein  Neighbors Host Created Updated
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Go to the top of the page Arnidovirineae
    African pouched rat arterivirus NC_026439 complete isolate:PREDICT-06509 - 14953 nt 10  vertebrates 02/10/2015 08/23/2018
    DeBrazza's monkey arterivirus NC_026509 complete isolate:PREDICT-06530 - 15684 nt 13  vertebrates 02/26/2015 08/13/2018
    Equine arteritis virus NC_002532 complete strain:Bucyrus - 12704 nt 10  90  vertebrates 07/16/1991 08/13/2018
    Free State vervet virus NC_029992 complete isolate:VSAI1003 - 15247 nt 14  17  vertebrates 04/29/2016 08/13/2018
    Kafue kinda chacma baboon virus NC_029053 complete isolate:KKCBV-1 - 14924 nt 14  1  vertebrates 02/04/2016 08/13/2018
    Kibale red colobus virus 1 NC_033553 incomplete strain:SHFV-krc1; isolate:SHFV-krc1_RC61 - 15446 nt 14  48  vertebrates 01/27/2017 08/13/2018
    Kibale red colobus virus 2 NC_034455 incomplete strain:SHFV-krc2; isolate:SHFV-krc2_RC61 - 15596 nt 14  27  vertebrates 05/05/2017 08/13/2018
    Kibale red-tailed guenon virus 1 NC_038292 incomplete isolate:krtg05 - 15264 nt 12  vertebrates 08/24/2018 08/24/2018
    Lactate dehydrogenase-elevating virus NC_001639 complete strain:Plagemann - 14104 nt 11  2  vertebrates 11/05/1994 08/13/2018
    Lelystad virus NC_043487 complete - 15111 nt 7  vertebrates 06/28/2019 06/28/2019
    Mikumi yellow baboon virus 1 NC_025112 complete isolate:MYBV_M58 - 14927 nt 13  10  vertebrates 09/29/2014 08/13/2018
    Olivier's shrew virus 1 NC_035127 complete isolate:Gkd-1 - 13766 nt 10  vertebrates 06/27/2017 08/13/2018
    Pebjah virus NC_027124 complete isolate:I621 - 15478 nt 15  2  vertebrates 06/02/2015 08/13/2018
    Porcine reproductive and respiratory syndrome virus NC_001961 complete - 15428 nt 11  990  vertebrates 10/21/1998 08/13/2018
    Porcine reproductive and respiratory syndrome virus 2 NC_038291 complete strain:ATCC VR-2332; culture-collection:ATCC:VR-2332 - 15411 nt 20  vertebrates 08/24/2018 08/24/2018
    toggle on/offRat arterivirus 1 complete isolate:Jilin2014 2 30827 nt 18  vertebrates 01/05/2016 12/24/2018
    Rodent arterivirus NC_040535 complete isolate:RtMc-Arterivirus/Tibet2014 - 15224 nt 2  vertebrates 02/12/2019 09/12/2019
    Simian hemorrhagic encephalitis virus NC_038293 complete isolate:Sukhumi - 15370 nt 13  vertebrates 08/24/2018 08/24/2018
    Simian hemorrhagic fever virus NC_003092 complete strain:LVR 42-0/M6941 - 15717 nt 15  10  vertebrates 08/30/2001 08/13/2018
    Southwest baboon virus 1 NC_025113 complete isolate:SWBV_16986_11/4/2013 - 14851 nt 14  3  vertebrates 09/29/2014 08/13/2018
    Wobbly possum disease virus NC_026811 complete isolate:WPDV - 12917 nt 10  1  vertebrates 04/16/2015 08/13/2018
Go to the top of the page Cornidovirineae
    Bat Hp-betacoronavirus/Zhejiang2013 NC_025217 complete isolate:Zhejiang2013 - 31491 nt vertebrates 10/03/2014 08/13/2018
    Bat coronavirus NC_034440 complete isolate:PREDICT/PDF-2180 - 29642 nt 10  11  vertebrates 05/05/2017 03/10/2019
    Bat coronavirus 1A NC_010437 complete strain:AFCD62 - 28326 nt 3  vertebrates 03/13/2008 08/13/2018
    Bat coronavirus BM48-31/BGR/2008 NC_014470 complete strain:BtCoV/BM48-31/BGR/2008 - 29276 nt vertebrates 08/27/2010 08/13/2018
    Bat coronavirus CDPHE15/USA/2006 NC_022103 complete strain:bat/USA/CDPHE15/2006 - 28035 nt 1  vertebrates 08/20/2013 08/13/2018
    Beluga whale coronavirus SW1 NC_010646 complete isolate:SW1 - 31686 nt 14  3  vertebrates 05/01/2008 08/13/2018
    Middle East respiratory syndrome-related coronavirus
          Betacoronavirus England 1 NC_038294 complete strain:England 1; isolate:H123990006 - 30111 nt 10  565  human, vertebrates 08/24/2018 08/24/2018
          Middle East respiratory syndrome-related coronavirus NC_019843 complete strain:HCoV-EMC - 30119 nt 11  565  human, vertebrates 12/13/2012 08/13/2018
    Betacoronavirus Erinaceus/VMC/DEU/2012 NC_039207 complete isolate:ErinaceusCoV/2012-174/GER/2012 - 30148 nt 12  2  vertebrates 08/24/2018 08/24/2018
    Betacoronavirus HKU24 NC_026011 complete strain:HKU24-R05005I - 31249 nt 10  2  vertebrates 01/07/2015 08/13/2018
    Betacoronavirus 1
          Bovine coronavirus NC_003045 complete isolate:BCoV-ENT - 31028 nt 12  307  human, vertebrates 08/02/2001 08/13/2018
          Human coronavirus OC43 NC_006213 complete strain:ATCC VR-759; serotype:OC43 - 30741 nt 307  human, vertebrates 02/21/2019 02/21/2019
    BtMr-AlphaCoV/SAX2011 NC_028811 complete isolate:BtMr-SAX2011 - 27935 nt vertebrates 01/05/2016 08/13/2018
    BtNv-AlphaCoV/SC2013 NC_028833 complete isolate:BtNv-SC2013 - 27783 nt vertebrates 01/05/2016 08/13/2018
    BtRf-AlphaCoV/HuB2013 NC_028814 complete isolate:BtRf-HuB2013 - 27608 nt vertebrates 01/05/2016 08/13/2018
    BtRf-AlphaCoV/YN2012 NC_028824 complete isolate:BtRf-YN2012 - 26975 nt vertebrates 01/05/2016 08/13/2018
    Bulbul coronavirus HKU11-934 NC_011547 complete - 26487 nt 1  vertebrates 08/24/2018 08/24/2018
    Human coronavirus 229E
          Camel alphacoronavirus NC_028752 complete isolate:camel/Riyadh/Ry141/2015 - 27395 nt 65  human, vertebrates 01/05/2016 08/13/2018
          Human coronavirus 229E NC_002645 complete strain:229E - 27317 nt 65  human, vertebrates 01/11/2001 08/13/2018
    Common moorhen coronavirus HKU21 NC_016996 complete strain:HKU21-8295 - 26223 nt vertebrates 03/30/2012 08/13/2018
    Coronavirus AcCoV-JC34 NC_034972 complete isolate:AcCoV-JC34 - 27682 nt vertebrates 06/13/2017 08/13/2018
    Alphacoronavirus 1
          Feline infectious peritonitis virus NC_002306 complete serotype:2; isolate:79-1146 - 29355 nt 130  vertebrates 05/11/2000 08/13/2018
          Swine enteric coronavirus NC_028806 complete strain:Italy/213306/2009 - 28111 nt 130  vertebrates 01/05/2016 08/13/2018
          Transmissible gastroenteritis virus NC_038861 complete strain:Purdue; isolate:PUR46-MAD - 28586 nt 130  vertebrates 05/11/2000 08/24/2018
    Ferret coronavirus NC_030292 complete isolate:FRCoV-NL-2010 - 28434 nt 4  vertebrates 06/10/2016 08/13/2018
    Human coronavirus HKU1 NC_006577 complete isolate:HKU1 - 29926 nt 46  human 12/28/2004 08/13/2018
    Human coronavirus NL63 NC_005831 complete strain:Amsterdam I - 27553 nt 66  human 03/23/2004 08/13/2018
    Avian coronavirus
          Infectious bronchitis virus NC_001451 complete strain:Beaudette - 27608 nt 10  390  human, vertebrates 06/12/1993 08/13/2018
          Turkey coronavirus NC_010800 complete isolate:MG10 - 27657 nt 11  390  human, vertebrates 06/03/2008 08/13/2018
    Lucheng Rn rat coronavirus NC_032730 complete isolate:Lucheng-19 - 28763 nt vertebrates 01/17/2017 08/13/2018
    Magpie-robin coronavirus HKU18 NC_016993 complete strain:HKU18-chu3 - 26689 nt vertebrates 03/30/2012 08/13/2018
    Miniopterus bat coronavirus HKU8 NC_010438 complete strain:AFCD77 - 28773 nt 4  vertebrates 03/13/2008 08/13/2018
    Mink coronavirus strain WD1127 NC_023760 complete strain:WD1127 - 28941 nt 10  vertebrates 03/12/2014 08/13/2018
    Munia coronavirus HKU13-3514 NC_011550 complete - 26552 nt vertebrates 11/13/2008 08/13/2018
    Murine coronavirus
          Murine hepatitis virus NC_001846 complete strain:MHV-A59 - 31357 nt 32  vertebrates 11/22/1997 08/13/2018
          Rat coronavirus Parker NC_012936 complete strain:Parker - 31250 nt 10  32  vertebrates 07/13/2009 08/13/2018
    NL63-related bat coronavirus NC_032107 complete strain:BtKYNL63-9a - 28363 nt 2  vertebrates 12/14/2016 08/13/2018
    Night heron coronavirus HKU19 NC_016994 complete strain:HKU19-6918 - 26077 nt vertebrates 03/30/2012 08/13/2018
    Pipistrellus bat coronavirus HKU5 NC_009020 complete strain:HKU5-1 LMH03f - 30482 nt 7  vertebrates 02/21/2007 08/13/2018
    Porcine coronavirus HKU15 NC_039208 complete strain:HKU15-155 - 25425 nt 114  vertebrates 08/24/2018 08/24/2018
    Porcine epidemic diarrhea virus NC_003436 complete strain:CV777 - 28033 nt 637  vertebrates 04/23/2001 08/13/2018
    Rabbit coronavirus HKU14 NC_017083 complete strain:HKU14-1 - 31100 nt 11  3  vertebrates 07/10/2012 08/13/2018
    Rhinolophus bat coronavirus HKU2 NC_009988 complete strain:HKU2/GD/430/2006 - 27165 nt 8  vertebrates 11/20/2007 08/13/2018
    Rousettus bat coronavirus NC_030886 complete isolate:GCCDC1 356 - 30161 nt 10  1  vertebrates 09/12/2016 08/13/2018
    Rousettus bat coronavirus HKU10 NC_018871 complete isolate:183A - 28494 nt 7  vertebrates 10/18/2012 08/13/2018
    Rousettus bat coronavirus HKU9 NC_009021 complete strain:HKU9-1 BF_005I - 29114 nt 8  vertebrates 02/21/2007 08/13/2018
    Scotophilus bat coronavirus 512 NC_009657 complete strain:BtCoV/512/2005 - 28203 nt vertebrates 07/24/2007 08/13/2018
    Severe acute respiratory syndrome-related coronavirus
          Severe acute respiratory syndrome coronavirus 2 NC_045512 complete isolate:Wuhan-Hu-1 - 29903 nt 12  825  human, vertebrates 01/13/2020 01/28/2020
          Severe acute respiratory syndrome-related coronavirus NC_004718 complete isolate:Tor2 - 29751 nt 14  825  human, vertebrates 04/14/2003 08/13/2018
    Sparrow coronavirus HKU17 NC_016992 complete strain:HKU17-6124 - 26083 nt vertebrates 03/30/2012 08/13/2018
    Tylonycteris bat coronavirus HKU4 NC_009019 complete strain:HKU4-1 B04f - 30286 nt 8  vertebrates 02/21/2007 08/13/2018
    Wencheng Sm shrew coronavirus NC_035191 complete isolate:Xingguo-101 - 25995 nt 8  vertebrates 07/14/2017 08/13/2018
    White-eye coronavirus HKU16 NC_016991 complete strain:HKU16-6847 - 26041 nt vertebrates 03/30/2012 08/13/2018
    Wigeon coronavirus HKU20 NC_016995 complete strain:HKU20-9243 - 26227 nt 10  vertebrates 03/30/2012 08/13/2018
Go to the top of the page Mesnidovirineae
    Beihai Nido-like virus 1 NC_032496 incomplete strain:BZL87871 - 20278 nt invertebrates 12/29/2016 08/13/2018
    Casuarina virus NC_023986 complete isolate:0071 - 19917 nt invertebrates 04/14/2014 08/13/2018
    Alphamesonivirus 1
          Cavally virus NC_015668 complete isolate:C79 - 20128 nt 22  invertebrates 06/24/2011 08/13/2018
          Nam Dinh virus NC_015874 complete isolate:02VN178 - 20192 nt 22  invertebrates 07/29/2011 08/13/2018
    Dak Nong virus NC_038297 complete strain:HL30 - 20307 nt invertebrates 08/24/2018 08/24/2018
    Dianke virus NC_036586 complete strain:SEN235030 - 20106 nt 2  invertebrates 01/13/2018 08/13/2018
    Hana virus NC_020899 complete strain:A4/CI/2004 - 20070 nt invertebrates 04/05/2013 08/13/2018
    Kadiweu virus NC_043488 complete strain:BrMS-MQ10 - 20398 nt 06/28/2019 06/28/2019
    Karang Sari virus NC_038296 complete strain:JKT10701 - 20795 nt invertebrates 08/24/2018 08/24/2018
    Meno virus NC_020900 complete strain:E9/CI/2004 - 19979 nt invertebrates 04/05/2013 08/13/2018
    Nse virus NC_020901 complete strain:F24/CI/2004 - 20074 nt invertebrates 04/05/2013 08/13/2018
    Ofaie virus NC_043489 complete strain:BrMS-MQ10 - 19867 nt 06/28/2019 06/28/2019
    Yichang virus NC_040534 complete isolate:HB-MLV - 20949 nt 02/12/2019 09/12/2019
Go to the top of the page Monidovirineae
    Planarian secretory cell nidovirus NC_040361 complete isolate:UIUC - 41178 nt invertebrates 02/12/2019 09/12/2019
Go to the top of the page Ronidovirineae
    Beihai Nido-like virus 2 NC_032492 complete strain:BHXun32263 - 24648 nt 12/29/2016 08/13/2018
    Beihai hermit crab virus 4 NC_032490 incomplete strain:BHJJX25971 - 29385 nt invertebrates 12/29/2016 08/13/2018
    Gill-associated virus NC_010306 complete - 26253 nt 1  invertebrates 02/05/2008 08/13/2018
    Wenling nido-like virus 1 NC_032763 incomplete strain:WLJQ99370 - 24854 nt invertebrates 01/17/2017 08/13/2018
    Yellow head virus NC_043505 complete isolate:Chachoengsao 1998 - 26662 nt 5  invertebrates 06/28/2019 06/28/2019
Go to the top of the page Tornidovirineae
    Ball python nidovirus 1 NC_024709 complete strain:07-53 - 33452 nt 1  vertebrates 08/25/2014 08/13/2018
    Bovine nidovirus TCH5 NC_027199 complete isolate:TCH5 - 20261 nt vertebrates 06/06/2015 08/13/2018
    Breda virus NC_007447 complete strain:Breda 1 - 28475 nt 4  human, vertebrates 10/05/2005 08/13/2018
    Chinook salmon bafinivirus NC_026812 complete isolate:NIDO - 27004 nt 2  vertebrates 04/16/2015 08/13/2018
    Fathead minnow nidovirus NC_038295 complete - 27318 nt vertebrates 08/24/2018 08/24/2018
    Goat torovirus NC_034976 complete strain:SZ - 28487 nt vertebrates 06/13/2017 08/13/2018
    Porcine torovirus NC_022787 complete strain:SH1 - 28301 nt 4  vertebrates 11/12/2013 08/13/2018
    Shingleback nidovirus 1 NC_043474 incomplete - 23832 nt vertebrates 06/28/2019 06/28/2019
    White bream virus NC_008516 complete strain:DF24/00 - 26660 nt vertebrates 10/24/2006 08/13/2018
    Xinzhou nematode virus 6 NC_043490 incomplete strain:XZSJSC61041 - 25960 nt invertebrates 06/28/2019 06/28/2019
    Xinzhou toro-like virus NC_033700 complete strain:XZSJSC65757 - 30353 nt invertebrates 02/16/2017 08/13/2018
Go to the top of the page unclassified Nidovirales
    Aplysia californica nido-like virus NC_040711 complete isolate:EK - 35906 nt 02/12/2019 09/12/2019
    Morelia viridis nidovirus NC_035465 complete strain:S14-1323_MVNV - 32399 nt 2  vertebrates 08/24/2017 08/13/2018
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