| Sequence data: | genome assemblies: 19; sequence reads: 35 | (See Genome Assembly and Annotation report) | | | Statistics: | median total length (Mb): 2458.64 | | median protein count: 63577 | | median GC%: 41.5 | | NCBI Annotation Release: | 106 |
- An improved pig reference genome sequence to enable pig genetics and genomics research. Warr A, et al. Gigascience 2020 Jun 1
- Molecular characterization of the complete mitochondrial genome sequence of Indian wild pig (Sus scrofa cristatus). Kumar Jadav K, et al. Anim Biotechnol 2019 Apr
- Development and Genome Sequencing of a Laboratory-Inbred Miniature Pig Facilitates Study of Human Diabetic Disease. Zhang L, et al. iScience 2019 Sep 27
- Cloning and characterization of the porcine DBC1 gene encoding deleted in bladder cancer. Larsen K, et al. Mol Biol Rep 2015 Feb
- Molecular characterization and expression patterns of the actinin-associated LIM protein (ALP) subfamily genes in porcine skeletal muscle. Xue K, et al. Gene 2014 Apr 10
- Functional characterization of porcine LSm14A in IFN-β induction. Wen G, et al. Vet Immunol Immunopathol 2013 Sep 1
- Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars. Li M, et al. Nat Genet 2013 Dec
- Molecular cloning, characterization and gene expression of the full length cDNA encoding the porcine CD11b(αM) and chromosomal localization of the porcine CD11a(αL)-CD11b(αM)-CD11b(αD) gene cluster. Sanz G, et al. Vet Immunol Immunopathol 2012 Jan 15
- Characterization and expression analysis in the developing embryonic brain of the porcine FET family: FUS, EWS, and TAF15. Blechingberg J, et al. Gene 2012 Feb 1
- Analyses of pig genomes provide insight into porcine demography and evolution. Groenen MA, et al. Nature 2012 Nov 15
- The sequence and analysis of a Chinese pig genome. Fang X, et al. Gigascience 2012 Nov 15
- Association of genetic variants for FABP3 gene with back fat thickness and intramuscular fat content in pig. Cho KH, et al. Mol Biol Rep 2011 Mar
- Mapping, cDNA cloning and tissue expression of the porcine thyrotropin-releasing hormone receptor gene. Jiang X, et al. Anim Biotechnol 2011 Jan
- Sequence identification, chromosomal mapping and tissue specific expression of the porcine paraoxonase 1 (PON1) gene. Xie S, et al. Mol Biol Rep 2010 Mar
- Expression of DLK1 splice variants during porcine adipocyte development in vitro and in vivo. Samulin J, et al. Anim Genet 2009 Apr
- Mapping of the porcine FBN2, YWHAQ, CNN3, DCN, POSTN, SPARC, RBM39 and GNAS genes, expressed in foetal skeletal muscles. Stratil A, et al. Anim Genet 2008 Apr
- K ATP channels in pig and human intracranial arteries. Ploug KB, et al. Eur J Pharmacol 2008 Dec 28
- Molecular cloning of porcine RP105/MD-1 involved in recognition of extracellular phosphopolysaccharides from Lactococcus lactis ssp. cremoris. Tohno M, et al. Mol Immunol 2007 Apr
- Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. Gorodkin J, et al. Genome Biol 2007
- Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR. Nygard AB, et al. BMC Mol Biol 2007 Aug 15
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Reference genome:  
Sus scrofa Sscrofa11.1|
Loc
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Type
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Name
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RefSeq
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INSDC
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Size (Mb)
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GC%
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Protein
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rRNA
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tRNA
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Other RNA
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Gene
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Pseudogene
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| Chr | 1 | NC_010443.5 | CM000812.5 | 274.33 | 40.2 | 5,392 | - | 21 | 1,255 | 2,423 | 260 | | | Chr | 2 | NC_010444.4 | CM000813.5 | 151.94 | 42.5 | 5,641 | - | 29 | 988 | 2,683 | 257 | | | Chr | 3 | NC_010445.4 | CM000814.5 | 132.85 | 44.2 | 4,054 | - | 36 | 941 | 1,805 | 109 | | | Chr | 4 | NC_010446.5 | CM000815.5 | 130.91 | 41.6 | 3,628 | - | 70 | 868 | 1,650 | 104 | | | Chr | 5 | NC_010447.5 | CM000816.5 | 104.53 | 42.2 | 3,219 | - | 12 | 653 | 1,458 | 103 | | | Chr | 6 | NC_010448.4 | CM000817.5 | 170.84 | 44.7 | 6,262 | - | 16 | 1,282 | 2,724 | 167 | | | Chr | 7 | NC_010449.5 | CM000818.5 | 121.84 | 43.1 | 3,720 | - | 143 | 889 | 1,978 | 133 | | | Chr | 8 | NC_010450.4 | CM000819.5 | 138.97 | 39.5 | 2,216 | - | 2 | 644 | 1,096 | 109 | | | Chr | 9 | NC_010451.4 | CM000820.5 | 139.51 | 41.2 | 3,659 | - | 8 | 893 | 1,715 | 169 | | | Chr | 10 | NC_010452.4 | CM000821.5 | 69.36 | 42.7 | 1,455 | - | 5 | 428 | 664 | 54 | | | Chr | 11 | NC_010453.5 | CM000822.5 | 79.17 | 40.6 | 1,156 | - | 5 | 406 | 559 | 43 | | | Chr | 12 | NC_010454.4 | CM000823.5 | 61.6 | 47.7 | 3,151 | - | 44 | 708 | 1,468 | 58 | | | Chr | 13 | NC_010455.5 | CM000824.5 | 208.34 | 39.9 | 4,724 | - | 4 | 918 | 1,841 | 200 | | | Chr | 14 | NC_010456.5 | CM000825.5 | 141.76 | 43.2 | 4,088 | - | 11 | 811 | 1,667 | 132 | | | Chr | 15 | NC_010457.5 | CM000826.5 | 140.41 | 39.9 | 2,727 | - | 7 | 561 | 1,106 | 115 | | | Chr | 16 | NC_010458.4 | CM000827.5 | 79.94 | 40.3 | 940 | - | 5 | 390 | 588 | 50 | | | Chr | 17 | NC_010459.5 | CM000828.5 | 63.49 | 44.7 | 1,823 | - | 5 | 459 | 821 | 46 | | | Chr | 18 | NC_010460.4 | CM000829.5 | 55.98 | 43.1 | 1,368 | - | 17 | 400 | 659 | 41 | | | Chr | X | NC_010461.5 | CM000830.5 | 125.94 | 40.4 | 2,482 | - | 8 | 523 | 1,172 | 170 | | | Chr | Y | NC_010462.3 | LT634572.1 | 43.55 | 47.5 | 118 | - | - | 57 | 147 | 45 | | | | MT | NC_000845.1 | - | 0.02 | 39.5 | 13 | 2 | 22 | - | 13 | - | | | Un | - | . | - | 66.63 | 43.3 | 1,741 | 2 | 62 | 446 | 2,127 | 719 | |
Click on chromosome name to open Genome Data Viewer |