| Sequence data: | genome assemblies: 6; sequence reads: 3 | (See Genome Assembly and Annotation report) | | | Statistics: | median total length (Mb): 3050.4 | | median protein count: 80692 | | median GC%: 40.81 | | NCBI Annotation Release: | 105 |
- Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics 2011 Sep
- Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content. Hughes JF, et al. Nature 2010 Jan 28
- Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway. Kuroki Y, et al. Nat Genet 2006 Feb
- Initial sequence of the chimpanzee genome and comparison with the human genome. Chimpanzee Sequencing and Analysis Consortium. Nature 2005 Sep 1
- Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee. Hughes JF, et al. Nature 2005 Sep 1
- DNA sequence and comparative analysis of chimpanzee chromosome 22. Watanabe H, et al. Nature 2004 May 27
- Orthologous numbering of great ape and human chromosomes is essential for comparative genomics. McConkey EH Cytogenet Genome Res 2004
- Rapid evolution of NK cell receptor systems demonstrated by comparison of chimpanzees and humans. Khakoo SI, et al. Immunity 2000 Jun
- Gene diversity of chimpanzee ABO blood group genes elucidated from exon 7 sequences. Sumiyama K, et al. Gene 2000 Dec 23
- Comparison of allele O sequences of the human and non-human primate ABO system. Kermarrec N, et al. Immunogenetics 1999 Jun
- tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Lowe TM, et al. Nucleic Acids Res 1997 Mar 1
- The mitochondrial DNA molecule of Sumatran orangutan and a molecular proposal for two (Bornean and Sumatran) species of orangutan. Xu X, et al. J Mol Evol 1996 Nov
- Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs. Horai S, et al. Proc Natl Acad Sci U S A 1995 Jan 17
- Molecular genetics of chimpanzee Rh-related genes: their relationship with the R-C-E-F blood group system, the chimpanzee counterpart of the human rhesus system. Salvignol I, et al. Biochem Genet 1994 Jun
- Man's place in Hominoidea revealed by mitochondrial DNA genealogy. Horai S, et al. J Mol Evol 1992 Jul
- Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis. Foran DR, et al. Nucleic Acids Res 1988 Jul 11
- A comparison of the small ribosomal RNA genes from the mitochondrial DNA of the great apes and humans: sequence, structure, evolution, and phylogenetic implications. Hixson JE, et al. Mol Biol Evol 1986 Jan
More...
Reference genome:  
Pan troglodytes Clint_PTRv2Submitter: The International Chimpanzee Chromosome 22 Consortium |
Loc
|
Type
|
Name
|
RefSeq
|
INSDC
|
Size (Mb)
|
GC%
|
Protein
|
rRNA
|
tRNA
|
Other RNA
|
Gene
|
Pseudogene
|
|---|
| | master WGS | - | NBAG00000000.3 | 2,993.16 | 40.7 | 90,590 | 13 | 5 | 99,316 | 55,892 | 14,307 | | | Chr | 1 | NC_036879.1 | CM009238.2 | 224.24 | 41.9 | 7,926 | 1 | 46 | 2,012 | 3,826 | 673 | | | Chr | 2A | NC_036880.1 | CM009239.2 | 108.02 | 41.1 | 2,720 | 1 | 4 | 896 | 1,354 | 225 | | | Chr | 2B | NC_036881.1 | CM009240.2 | 128.76 | 39.6 | 3,140 | 1 | 4 | 810 | 1,386 | 262 | | | Chr | 3 | NC_036882.1 | CM009241.2 | 196.56 | 39.7 | 4,888 | 1 | 4 | 1,339 | 2,248 | 436 | | | Chr | 4 | NC_036883.1 | CM009242.2 | 189.15 | 38.3 | 3,223 | - | 1 | 1,175 | 1,816 | 369 | | | Chr | 5 | NC_036884.1 | CM009243.2 | 159.32 | 39.7 | 2,971 | - | 18 | 1,032 | 1,768 | 334 | | | Chr | 6 | NC_036885.1 | CM009244.2 | 168.37 | 39.7 | 3,999 | 1 | 133 | 1,249 | 2,305 | 435 | | | Chr | 7 | NC_036886.1 | CM009245.2 | 156.05 | 40.9 | 3,783 | - | 13 | 1,120 | 2,035 | 394 | | | Chr | 8 | NC_036887.1 | CM009246.2 | 143.34 | 40.2 | 2,771 | - | 6 | 900 | 1,515 | 286 | | | Chr | 9 | NC_036888.1 | CM009247.2 | 110.51 | 41.5 | 3,241 | - | 3 | 795 | 1,496 | 278 | | | Chr | 10 | NC_036889.1 | CM009248.2 | 129.81 | 41.8 | 3,702 | - | 3 | 796 | 1,539 | 279 | | | Chr | 11 | NC_036890.1 | CM009249.2 | 130.78 | 41.6 | 4,957 | - | 14 | 939 | 2,276 | 384 | | | Chr | 12 | NC_036891.1 | CM009250.2 | 131 | 40.9 | 4,362 | - | 10 | 1,061 | 1,985 | 346 | | | Chr | 13 | NC_036892.1 | CM009251.2 | 95.6 | 38.6 | 1,492 | - | 4 | 622 | 890 | 172 | | | Chr | 14 | NC_036893.1 | CM009252.2 | 87.72 | 41.0 | 2,526 | - | 19 | 800 | 1,406 | 231 | | | Chr | 15 | NC_036894.1 | CM009253.2 | 80.52 | 42.3 | 2,478 | - | 8 | 980 | 1,347 | 244 | | | Chr | 16 | NC_036895.1 | CM009254.2 | 75.91 | 44.9 | 3,013 | - | 28 | 623 | 1,333 | 164 | | | Chr | 17 | NC_036896.1 | CM009255.2 | 76.55 | 45.7 | 4,392 | - | 34 | 893 | 1,925 | 241 | | | Chr | 18 | NC_036897.1 | CM009256.2 | 74.77 | 39.9 | 1,344 | - | 1 | 514 | 708 | 142 | | | Chr | 19 | NC_036898.1 | CM009257.2 | 56.73 | 48.4 | 4,949 | - | 7 | 834 | 1,997 | 213 | | | Chr | 20 | NC_036899.1 | CM009258.2 | 64.04 | 44.2 | 2,128 | 2 | - | 573 | 1,026 | 159 | | | Chr | 21 | NC_036900.1 | CM009259.2 | 33.23 | 41.1 | 808 | - | 1 | 303 | 471 | 76 | | | Chr | 22 | NC_036901.1 | CM009260.2 | 33.7 | 48.2 | 1,885 | - | - | 471 | 823 | 102 | | | Chr | X | NC_036902.1 | CM009261.2 | 151.58 | 39.7 | 2,737 | 1 | 2 | 697 | 1,646 | 444 | | | | MT | NC_001643.1 | - | 0.02 | 43.7 | 13 | 2 | 22 | - | 13 | - | | | Un | - | . | - | 217.77 | 38.1 | 1,244 | - | 13 | 519 | 1,187 | 317 | |
Click on chromosome name to open Genome Data Viewer |