Pseudomonas coronafaciens (ID 2255) - Genome - NCBI

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Pseudomonas coronafaciens
Representative genome: Pseudomonas coronafaciens pv. oryzae str. 1_6
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ID: 2255

Organism Overview ; Genome Assembly and Annotation report [76] ; Genome Tree report [74] ; Plasmid Annotation Report [4]

Pseudomonas coronafaciens

Pseudomonas coronafaciens overview

Lineage: Bacteria[35995]; Pseudomonadota[10580]; Gammaproteobacteria[4345]; Pseudomonadales[505]; Pseudomonadaceae[426]; Pseudomonas[364]; Pseudomonas syringae group[19]; Pseudomonas coronafaciens[1]

Pseudomonas coronafaciens. This is a gram-negative bacterium pathogenic to plants. Also called Pseudomonas syringae group genomosp. 4.

Summary

Sequence data:

genome assemblies: 76

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 5.66615

median protein count: 4964

median GC%: 57.8

Publications (limited to 20 most recent records)

Development of PCR and TaqMan PCR Assays to Detect Pseudomonas coronafaciens, a Causal Agent of Halo Blight of Oats. An JH, et al. Plant Pathol J 2015 Mar
De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Reinhardt JA, et al. Genome Res 2009 Feb

Representative (genome information for reference and representative genomes)

Reference genome:

Pseudomonas coronafaciens pv. oryzae str. 1_6

Submitter: University of North Carolina at Chapel Hill

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	-	NZ_CP046035.1	CP046035.1	5.66	57.9	4,910	16	63	4	5,103	110

Plsm	pPor1_6	NZ_CP046036.1	CP046036.1	0.05	54.6	54	-	-	-	57	3

Dendrogram (based on genomic BLAST)

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Pseudomonas coronafaciens
Pseudomonas coronafaciens

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