Genome

Pseudomonas syringae group genomosp. 3 Pseudomonas syringae group genomosp. 3 overview Lineage: Bacteria[36356]; Pseudomonadota[10658]; Gammaproteobacteria[4370]; Pseudomonadales[518]; Pseudomonadaceae[429]; Pseudomonas[365]; Pseudomonas syringae group[20]; Pseudomonas syringae group genomosp. 3[1]

Pseudomonas. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar More...flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans.Pseudomonas syringae. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.Pseudomonas syringae group genomosp. 3. Genomospecies 3 includes P. syringae pathovars tomato, persicae, antirrhini, maculicola, viburni, berberidis, apii, delphinii, passiflorae, philadelphi, ribicola and primulae. Less...

Summary Sequence data:  genome assemblies: 115; sequence reads: 2  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 6.28395  median protein count: 5509  median GC%: 58.6 Publications (limited to 20 most recent records) Adaptation of the pathogen, Pseudomonas syringae, during experimental evolution on a native vs. alternative host plant. Meaden S, et al. Mol Ecol 2017 Apr Genome Sequences of Two Pseudomonas syringae pv. tomato Race 1 Strains, Isolated from Tomato Fields in California. Thapa SP, et al. Genome Announc 2016 Mar 10 Whole-Genome Sequencing of 10 Pseudomonas syringae Strains Representing Different Host Range Spectra. Bartoli C, et al. Genome Announc 2015 Apr 30 Draft Genome Sequence of Pseudomonas syringae pv. persicae NCPPB 2254. Zhao W, et al. Genome Announc 2015 Jun 4 Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates. Baltrus DA, et al. PLoS Pathog 2011 Jul A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000. Almeida NF, et al. Mol Plant Microbe Interact 2009 Jan The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A 2003 Sep 2 More...  Representative (genome information for reference and representative genomes) Reference genome:   Pseudomonas syringae pv. tomato str. DC3000 Submitter: TIGR Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes Environment: OxygenReq:Aerobic, TemperatureRange:Mesophilic, Habitat:Multiple Phenotype: Disease:Plant rot Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NC_004578.1 AE016853.1 6.4 58.4 5,466 16 63 4 5,765 216 Plsm pDC3000A NC_004633.1 AE016855.1 0.07 55.1 74 - - - 77 3 Plsm pDC3000B NC_004632.1 AE016854.1 0.07 56.2 68 - - - 77 9 Dendrogram (based on genomic BLAST)