Genome

Acinetobacter nosocomialis overview Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Moraxellales[188]; Moraxellaceae[188]; Acinetobacter[98]; Acinetobacter calcoaceticus/baumannii complex[8]; Acinetobacter nosocomialis[1]

Acinetobacter. Bacteria of the genus Acinetobacter are ubiquitously distributed in nature. They are gram-negative, strictly aerobic, nonmotile, diplococcoid rods that are oxidase negative and catalase positive. They are found in various types of soils and waters and are occasionally found in foodstocks.They are normal inhabitants More...of human skin and are capable of transitory colonization of the upper respiratory tract. They can cause infection in debilitated patients.DNA-DNA hybridization studies have been used to identify DNA groups (genomic species) within the genus Acinetobacter.Acinetobacter sp. RUH2624.Also called Acinetobacter genomosp. 13TU strain RUH2624. Less...

Summary Sequence data:  genome assemblies: 434; sequence reads: 2  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 3.90571  median protein count: 3609  median GC%: 38.7 Publications (limited to 20 most recent records) MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy. Rocha U, et al. Mol Ecol Resour 2024 Feb Genomic Characterization of Mobile Genetic Elements Associated with Multidrug-Resistant Acinetobacter Non-baumannii Species from Southern Thailand. Yaikhan T, et al. Antibiotics (Basel) 2024 Feb 2 Phylogenomic and phenotypic analyses highlight the diversity of antibiotic resistance and virulence in both human and non-human Acinetobacter baumannii. Sykes EME, et al. mSphere 2024 Mar 26 Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa. Magnúsdóttir S, et al. Front Microbiol 2023 Novel Clinical mNGS-Based Machine Learning Model for Rapid Antimicrobial Susceptibility Testing of Acinetobacter baumannii. Hu X, et al. J Clin Microbiol 2023 May 23 Insights into the genetic contexts of sulfonamide resistance among early clinical isolates of Acinetobacter baumannii. Bala A, et al. Infect Genet Evol 2023 Aug Genomic dissection of endemic carbapenem resistance reveals metallo-beta-lactamase dissemination through clonal, plasmid and integron transfer. Macesic N, et al. Nat Commun 2023 Aug 8 Comparative genomics analysis of Acinetobacter baumannii multi-drug resistant and drug sensitive strains in China. Dong JF, et al. Microb Pathog 2022 Apr Screening for Microbial Metal-Chelating Siderophores for the Removal of Metal Ions from Solutions. Hofmann M, et al. Microorganisms 2021 Jan 5 Draft Genome Sequence of Environmental Isolate Acinetobacter nosocomialis U20-HoPe-S34-3 from Germany. Wilharm G Microbiol Resour Announc 2021 May 27 MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8 Comparative Genomics of Acinetobacter baumannii Clinical Strains From Brazil Reveals Polyclonal Dissemination and Selective Exchange of Mobile Genetic Elements Associated With Resistance Genes. Leal NC, et al. Front Microbiol 2020 Temporal encoding of bacterial identity and traits in growth dynamics. Zhang C, et al. Proc Natl Acad Sci U S A 2020 Aug 18 FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25 A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Parks DH, et al. Nat Biotechnol 2018 Nov Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life. Parks DH, et al. Nat Microbiol 2017 Nov Influence of ACB complex genospecies on clinical outcomes in a U.S. hospital with high rates of multidrug resistance. Fitzpatrick MA, et al. J Infect 2015 Feb A case of IMP-4-, OXA-421-, OXA-96-, and CARB-2-producing Acinetobacter pittii sequence type 119 in Australia. Kamolvit W, et al. J Clin Microbiol 2015 Feb A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii. Chan AP, et al. Genome Biol 2015 Jul 21 A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Roach DJ, et al. PLoS Genet 2015 Jul More...  Representative (genome information for reference and representative genomes) Reference genome:   Acinetobacter nosocomialis M2 Submitter: Des Moines University Human Pathogen Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NZ_CP040105.1 CP040105.1 3.82 38.8 3,456 18 73 4 3,589 38 Dendrogram (based on genomic BLAST)