| Sequence data: | genome assemblies: 8; sequence reads: 10 | (See Genome Assembly and Annotation report) | | | Statistics: | median total length (Mb): 2743.3 | | median protein count: 42093 | | median GC%: 42.3423 | | NCBI Annotation Release: | 106 |
- RNA binding protein Caprin-2 is a pivotal regulator of the central osmotic defense response. Konopacka A, et al. Elife 2015 Nov 12
- Inhibition of protein kinase C βII isoform ameliorates methylglyoxal advanced glycation endproduct-induced cardiomyocyte contractile dysfunction. Zhang L, et al. Life Sci 2014 Jan 14
- Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators. Bellott DW, et al. Nature 2014 Apr 24
- A high-fat diet increases L-carnitine synthesis through a differential maturation of the Bbox1 mRNAs. Rigault C, et al. Biochim Biophys Acta 2013 Feb
- KDM2B promotes pancreatic cancer via Polycomb-dependent and -independent transcriptional programs. Tzatsos A, et al. J Clin Invest 2013 Feb
- Antofine-induced connexin43 gap junction disassembly in rat astrocytes involves protein kinase Cβ. Huang YF, et al. Neurotoxicology 2013 Mar
- Induction of nitric oxide synthase expression by lipopolysaccharide is mediated by calcium-dependent PKCα-β1 in alveolar epithelial cells. Boncoeur É, et al. Am J Physiol Lung Cell Mol Physiol 2013 Jul 15
- ZF-CxxC domain-containing proteins, CpG islands and the chromatin connection. Long HK, et al. Biochem Soc Trans 2013 Jun
- Serine phosphorylation sites on IRS2 activated by angiotensin II and protein kinase C to induce selective insulin resistance in endothelial cells. Park K, et al. Mol Cell Biol 2013 Aug
- Reactivation of fetal splicing programs in diabetic hearts is mediated by protein kinase C signaling. Verma SK, et al. J Biol Chem 2013 Dec 6
- Photoreceptor signaling: supporting vision across a wide range of light intensities. Arshavsky VY, et al. J Biol Chem 2012 Jan 13
- CPEB2-eEF2 interaction impedes HIF-1α RNA translation. Chen PJ, et al. EMBO J 2012 Feb 15
- Identification of ubiquitin-specific protease 9X (USP9X) as a deubiquitinase acting on ubiquitin-peroxin 5 (PEX5) thioester conjugate. Grou CP, et al. J Biol Chem 2012 Apr 13
- Protein phosphatase magnesium dependent 1A (PPM1A) plays a role in the differentiation and survival processes of nerve cells. Shohat M, et al. PLoS One 2012
- Smad ubiquitination regulatory factor-2 controls gap junction intercellular communication by modulating endocytosis and degradation of connexin43. Fykerud TA, et al. J Cell Sci 2012 Sep 1
- Overexpression of Smad ubiquitin regulatory factor 2 suppresses transforming growth factor-β mediated liver fibrosis. Cai Y, et al. J Dig Dis 2012 Jun
- Maxacalcitol ameliorates tubulointerstitial fibrosis in obstructed kidneys by recruiting PPM1A/VDR complex to pSmad3. Inoue K, et al. Lab Invest 2012 Dec
- CDK5 regulatory subunit-associated protein 1-like 1 (CDKAL1) is a tail-anchored protein in the endoplasmic reticulum (ER) of insulinoma cells. Brambillasca S, et al. J Biol Chem 2012 Dec 7
- Histone lysine methylation dynamics: establishment, regulation, and biological impact. Black JC, et al. Mol Cell 2012 Nov 30
- Differential responses of epithelial Sertoli cells of the rat testis to Toll-like receptor 2 and 4 ligands: implications for studies of testicular inflammation using bacterial lipopolysaccharides. Winnall WR, et al. Innate Immun 2011 Apr
- Hetero-oligomerization of neuronal glutamate transporters. Nothmann D, et al. J Biol Chem 2011 Feb 4
- Effect of chronic kidney disease on the expression of thiamin and folic acid transporters. Bukhari FJ, et al. Nephrol Dial Transplant 2011 Jul
- Zymophagy, a novel selective autophagy pathway mediated by VMP1-USP9x-p62, prevents pancreatic cell death. Grasso D, et al. J Biol Chem 2011 Mar 11
- Fbxl10/Kdm2b deficiency accelerates neural progenitor cell death and leads to exencephaly. Fukuda T, et al. Mol Cell Neurosci 2011 Mar
- Involvement of vascular peroxidase 1 in angiotensin II-induced vascular smooth muscle cell proliferation. Shi R, et al. Cardiovasc Res 2011 Jul 1
- KDM2b/JHDM1b, an H3K36me2-specific demethylase, is required for initiation and maintenance of acute myeloid leukemia. He J, et al. Blood 2011 Apr 7
- Upregulation of p21-activated Kinase 6 in rat brain cortex after traumatic brain injury. Zhao W, et al. J Mol Histol 2011 Jun
- Substrate-dependent gating of anion channels associated with excitatory amino acid transporter 4. Machtens JP, et al. J Biol Chem 2011 Jul 8
- The effects of exercise training on γ-butyrobetaine hydroxylase and novel organic cation transporter-2 gene expression in the rat. Broderick TL, et al. Appl Physiol Nutr Metab 2011 Dec
- Reduced expression of glutamate transporters vGluT1, EAAT2 and EAAT4 in learned helpless rats, an animal model of depression. Zink M, et al. Neuropharmacology 2010 Feb
- Regulation of the glutamate transporter EAAT4 by PIKfyve. Alesutan IS, et al. Cell Physiol Biochem 2010
- Identification of a deubiquitinating enzyme as a novel AGS3-interacting protein. Xu Z, et al. PLoS One 2010 Mar 17
- Effects of Arkadia on airway remodeling through enhancing TGF-beta signaling in allergic rats. Li XZ, et al. Lab Invest 2010 Jul
- Identification and characterisation of a Maf1/Macoco protein complex that interacts with GABAA receptors in neurons. Smith KR, et al. Mol Cell Neurosci 2010 Aug
- Abl activation regulates the dissociation of CAS from cytoskeletal vimentin by modulating CAS phosphorylation in smooth muscle. Jia L, et al. Am J Physiol Cell Physiol 2010 Sep
- Glutamate transporter EAAT4 in Purkinje cells controls intersynaptic diffusion of climbing fiber transmitter mediating inhibition of GABA release from interneurons. Satake S, et al. Eur J Neurosci 2010 Dec
- Ontogeny of Na(+)/L-carnitine transporter and of gamma-trimethylaminobutyraldehyde dehydrogenase and gamma-butyrobetaine hydroxylase genes expression in rat kidney. García-Delgado M, et al. Mech Ageing Dev 2009 Apr
- Transcription of the rat testis-specific Rtdpoz-T1 and -T2 retrogenes during embryo development: co-transcription and frequent exonisation of transposable element sequences. Huang CJ, et al. BMC Mol Biol 2009 Jul 25
- Members of a family of JmjC domain-containing oncoproteins immortalize embryonic fibroblasts via a JmjC domain-dependent process. Pfau R, et al. Proc Natl Acad Sci U S A 2008 Feb 12
- Control of AMPK-related kinases by USP9X and atypical Lys(29)/Lys(33)-linked polyubiquitin chains. Al-Hakim AK, et al. Biochem J 2008 Apr 15
- Cross talk between Smad transcription factors and TNF-alpha in intervertebral disc degeneration. Hiyama A, et al. Biochem Biophys Res Commun 2008 May 2
- The hairless phenotype of the Hirosaki hairless rat is due to the deletion of an 80-kb genomic DNA containing five basic keratin genes. Nanashima N, et al. J Biol Chem 2008 Jun 13
- SNP and haplotype mapping for genetic analysis in the rat. STAR Consortium., et al. Nat Genet 2008 May
- Rheb and mTOR regulate neuronal polarity through Rap1B. Li YH, et al. J Biol Chem 2008 Nov 28
- Testis-specific expression and genomic multiplicity of the rat Rtdpoz genes that encode bipartite TRAF- and POZ/BTB-domain proteins. Choo KB, et al. Gene 2007 Jan 31
- Arkadia-Smad7-mediated positive regulation of TGF-beta signaling in a rat model of tubulointerstitial fibrosis. Liu FY, et al. Am J Nephrol 2007
- V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet 2007 May
- The Nedd4-like family of E3 ubiquitin ligases and cancer. Chen C, et al. Cancer Metastasis Rev 2007 Dec
- The interaction of mPar3 with the ubiquitin ligase Smurf2 is required for the establishment of neuronal polarity. Schwamborn JC, et al. J Biol Chem 2007 Nov 30
- Enhancement of substrate-gated Cl- currents via rat glutamate transporter EAAT4 by PMA. Fang H, et al. Am J Physiol Cell Physiol 2006 May
- Intersubunit interactions in EAAT4 glutamate transporters. Torres-Salazar D, et al. J Neurosci 2006 Jul 12
- Anthrax toxin receptor 2-dependent lethal toxin killing in vivo. Scobie HM, et al. PLoS Pathog 2006 Oct
- Abnormal expression of Smurf2 during the process of rat liver fibrosis. Cai Y, et al. Chin J Dig Dis 2006
- Molecular cloning of rat Spetex2 family genes mapped on chromosome 15p16, encoding a 23-kilodalton protein associated with the plasma membranes of haploid spermatids. Iwamoto Y, et al. Biol Reprod 2005 Feb
- Gene and alternative splicing annotation with AIR. Florea L, et al. Genome Res 2005 Jan
- A protein phosphatase 2calpha-Ca2+ channel complex for dephosphorylation of neuronal Ca2+ channels phosphorylated by protein kinase C. Li D, et al. J Neurosci 2005 Feb 23
- Cloning and expression of a brain-specific putative UDP-GalNAc: polypeptide N-acetylgalactosaminyltransferase gene. Nakamura N, et al. Biol Pharm Bull 2005 Mar
- A centrosomal mechanism involving CDK5RAP2 and CENPJ controls brain size. Bond J, et al. Nat Genet 2005 Apr
- Carnitine deficiency and supplementation do not affect the gene expression of carnitine biosynthetic enzymes in rats. Davis AT, et al. J Nutr 2005 Apr
- Stimulation of endocannabinoid formation in brain slice cultures through activation of group I metabotropic glutamate receptors. Jung KM, et al. Mol Pharmacol 2005 Nov
- Localization and expression of the glutamate transporter, excitatory amino acid transporter 4, within astrocytes of the rat retina. Ward MM, et al. Cell Tissue Res 2004 Mar
- Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, et al. Nature 2004 Apr 1
- A genomic analysis of rat proteases and protease inhibitors. Puente XS, et al. Genome Res 2004 Apr
- A single Gbeta subunit locus controls cross-talk between protein kinase C and G protein regulation of N-type calcium channels. Doering CJ, et al. J Biol Chem 2004 Jul 9
- LC3 conjugation system in mammalian autophagy. Tanida I, et al. Int J Biochem Cell Biol 2004 Dec
- The EGF-TM7 family of the rat. Hamann J Immunogenetics 2004 Dec
- Mechanisms of TGF-beta signaling from cell membrane to the nucleus. Shi Y, et al. Cell 2003 Jun 13
- Glutamate modifies ion conduction and voltage-dependent gating of excitatory amino acid transporter-associated anion channels. Melzer N, et al. J Biol Chem 2003 Dec 12
- An inducible system to study the growth arrest properties of protein phosphatase 2C. Ofek P, et al. Methods Enzymol 2003
- Similar perisynaptic glial localization for the Na+,K+-ATPase alpha 2 subunit and the glutamate transporters GLAST and GLT-1 in the rat somatosensory cortex. Cholet N, et al. Cereb Cortex 2002 May
- Thyroid hormone controls carnitine status through modifications of gamma-butyrobetaine hydroxylase activity and gene expression. Galland S, et al. Cell Mol Life Sci 2002 Mar
- Profiling and selection of genes differentially expressed in the pylorus of rat strains with different proliferative responses and stomach cancer susceptibility. Yamashita S, et al. Carcinogenesis 2002 Jun
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A 2002 Dec 24
- Altered gene expression in cerebral capillaries of stroke-prone spontaneously hypertensive rats. Kirsch T, et al. Brain Res 2001 Aug 10
- Nesprins: a novel family of spectrin-repeat-containing proteins that localize to the nuclear membrane in multiple tissues. Zhang Q, et al. J Cell Sci 2001 Dec
- Molecular evidence of complex tissue- and sex-specific mRNA expression of the rat alpha(2u)-globulin multigene family. Saito K, et al. Biochem Biophys Res Commun 2000 Jun 7
- Complexes of the G protein subunit gbeta 5 with the regulators of G protein signaling RGS7 and RGS9. Characterization in native tissues and in transfected cells. Witherow DS, et al. J Biol Chem 2000 Aug 11
- X-linked retinitis pigmentosa: mutation spectrum of the RPGR and RP2 genes and correlation with visual function. Sharon D, et al. Invest Ophthalmol Vis Sci 2000 Aug
- Sequence and diversity of the rat delta T-cell receptor. Watson D, et al. Immunogenetics 2000 Jul
- Molecular characterization of the rat NK cell receptor 2B4. Kumaresan PR, et al. Mol Immunol 2000 Aug-Sep
- Molecular cloning and characterization of the cDNA encoding the rat liver gamma-butyrobetaine hydroxylase. Galland S, et al. Biochim Biophys Acta 1999 Oct 18
- Molecular characterization and in situ localization of a full-length cyclic nucleotide-gated channel in rat brain. Strijbos PJ, et al. Eur J Neurosci 1999 Dec
- Multiple members of a third subfamily of P-type ATPases identified by genomic sequences and ESTs. Halleck MS, et al. Genome Res 1998 Apr
- Distribution of heterotrimeric G-protein beta and gamma subunits in the rat brain. Betty M, et al. Neuroscience 1998 Jul
- Immunohistochemical localization of G protein beta1, beta2, beta3, beta4, beta5, and gamma3 subunits in the adult rat brain. Liang JJ, et al. J Neurochem 1998 Jul
- Carnitine biosynthesis: identification of the cDNA encoding human gamma-butyrobetaine hydroxylase. Vaz FM, et al. Biochem Biophys Res Commun 1998 Sep 18
- tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Lowe TM, et al. Nucleic Acids Res 1997 Mar 1
- Molecular cloning and expression of a 58-kDa cis-Golgi and intermediate compartment protein. Lahtinen U, et al. J Biol Chem 1996 Feb 23
- Comparative analysis of the ontogeny of a sodium-dependent bile acid transporter in rat kidney and ileum. Christie DM, et al. Am J Physiol 1996 Aug
- The identification of a novel cDNA preferentially expressed in the olfactory-limbic system of the adult rat. Schaar DG, et al. Brain Res 1996 May 20
- Identification, molecular cloning, and distribution of a short variant of the 5-hydroxytryptamine2C receptor produced by alternative splicing. Canton H, et al. Mol Pharmacol 1996 Oct
- Primary sequences of rat mu-calpain large and small subunits are, respectively, moderately and highly similar to those of human. Sorimachi H, et al. Biochim Biophys Acta 1996 Nov 11
- rSec6 and rSec8, mammalian homologs of yeast proteins essential for secretion. Ting AE, et al. Proc Natl Acad Sci U S A 1995 Oct 10
- Identification and molecular evolution of new dynein-like protein sequences in rat brain. Tanaka Y, et al. J Cell Sci 1995 May
- Comparative expressed-sequence-tag analysis of differential gene expression profiles in PC-12 cells before and after nerve growth factor treatment. Lee NH, et al. Proc Natl Acad Sci U S A 1995 Aug 29
- Structure and repertoire usage of rat TCR alpha-chain genes in T cells infiltrating heart allografts. Shirwan H, et al. J Immunol 1995 Feb 15
- Cloning and molecular characterization of the ontogeny of a rat ileal sodium-dependent bile acid transporter. Shneider BL, et al. J Clin Invest 1995 Feb
- Structural characterization and specificity of expression of E2F-5: a new member of the E2F family of transcription factors. Itoh A, et al. Cell Mol Biol Res 1995
- Sequence of rat mitochondrial glycerol-3-phosphate dehydrogenase cDNA. Evidence for EF-hand calcium-binding domains. Brown LJ, et al. J Biol Chem 1994 May 20
- [Continuing education--cross-professional offer not sufficient]. Gass M Sygeplejersken 1992 Nov 18
- The 4.4-kilodalton proline-rich polypeptides of the rat ventral prostate are the proteolytic products of a 637-kilodalton protein displaying highly repetitive sequences and encoded in a single exon. De Clercq N, et al. J Biol Chem 1992 May 15
- cDNA cloning, characterization, and brain region-specific expression of a neuromedin-B-preferring bombesin receptor. Wada E, et al. Neuron 1991 Mar
- Molecular cloning of putative odorant-binding and odorant-metabolizing proteins. Dear TN, et al. Biochemistry 1991 Oct 29
- Secretagogue-coupled changes in the expression of glutamine/glutamic acid-rich proteins (GRPs). Isoproterenol induces changes in GRP transcript expression and changes in isoforms secreted. Cooper LF, et al. J Biol Chem 1991 Feb 25
- Sequence of cDNA for rat cystathionine gamma-lyase and comparison of deduced amino acid sequence with related Escherichia coli enzymes. Erickson PF, et al. Biochem J 1990 Jul 15
- The complete nucleotide sequence of the Rattus norvegicus mitochondrial genome: cryptic signals revealed by comparative analysis between vertebrates. Gadaleta G, et al. J Mol Evol 1989 Jun
- Molecular cloning of rat type 2C (IA) protein phosphatase mRNA. Tamura S, et al. Proc Natl Acad Sci U S A 1989 Mar
- A single 12.5-kilobase androgen-regulated mRNA encoding multiple proline-rich polypeptides in the ventral prostate of the rat. Hemschoote K, et al. J Biol Chem 1988 Dec 15
- Overproduction of protein kinase C causes disordered growth control in rat fibroblasts. Housey GM, et al. Cell 1988 Feb 12
- Isolation of cDNA clones encoding protein kinase C: evidence for a protein kinase C-related gene family. Housey GM, et al. Proc Natl Acad Sci U S A 1987 Feb
- Expression and properties of two types of protein kinase C: alternative splicing from a single gene. Ono Y, et al. Science 1987 May 29
- Two types of complementary DNAs of rat brain protein kinase C. Heterogeneity determined by alternative splicing. Ono Y, et al. FEBS Lett 1986 Oct 6
- Analysis of a DNA segment from rat liver mitochondria containing the genes for the cytochrome oxidase subunits I, II and III, ATPase subunit 6, and several tRNA genes. Grosskopf R, et al. Curr Genet 1981 Nov
- tRNA genes in rat liver mitochondrial DNA. Grosskopf R, et al. Curr Genet 1981 Dec
More...
Reference genome:  
Rattus norvegicus Rnor_6.0|
Loc
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Type
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Name
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RefSeq
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INSDC
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Size (Mb)
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GC%
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Protein
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rRNA
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tRNA
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Other RNA
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Gene
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Pseudogene
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| | master WGS | - | AABR00000000.7 | 2,572.13 | 41.9 | - | - | - | - | - | - | | | Chr | 1 | NC_005100.4 | CM000072.5 | 282.76 | 43.1 | 7,447 | - | 30 | 1,615 | 4,981 | 937 | | | Chr | 2 | NC_005101.4 | CM000073.5 | 266.44 | 41.0 | 3,463 | - | 38 | 1,089 | 2,725 | 630 | | | Chr | 3 | NC_005102.4 | CM000074.5 | 177.7 | 42.7 | 4,337 | - | 10 | 916 | 2,969 | 510 | | | Chr | 4 | NC_005103.4 | CM000075.5 | 184.23 | 41.9 | 3,375 | - | 36 | 749 | 2,383 | 442 | | | Chr | 5 | NC_005104.4 | CM000076.5 | 173.71 | 42.7 | 3,481 | - | 8 | 707 | 2,194 | 411 | | | Chr | 6 | NC_005105.4 | CM000077.5 | 147.99 | 42.2 | 2,193 | - | 8 | 971 | 1,839 | 355 | | | Chr | 7 | NC_005106.4 | CM000078.5 | 145.73 | 42.8 | 3,399 | - | 10 | 814 | 2,319 | 474 | | | Chr | 8 | NC_005107.4 | CM000079.5 | 133.31 | 43.1 | 3,213 | - | 8 | 776 | 2,087 | 348 | | | Chr | 9 | NC_005108.4 | CM000080.5 | 122.1 | 42.2 | 2,502 | - | 2 | 509 | 1,442 | 261 | | | Chr | 10 | NC_005109.4 | CM000081.5 | 112.63 | 45.2 | 4,269 | - | 60 | 795 | 2,622 | 312 | | | Chr | 11 | NC_005110.4 | CM000082.5 | 90.46 | 41.2 | 1,493 | - | 3 | 428 | 1,094 | 218 | | | Chr | 12 | NC_005111.4 | CM000083.5 | 52.72 | 47.1 | 1,588 | 1 | 6 | 359 | 1,024 | 135 | | | Chr | 13 | NC_005112.4 | CM000084.5 | 114.03 | 41.8 | 1,758 | - | 33 | 510 | 1,244 | 247 | | | Chr | 14 | NC_005113.4 | CM000085.5 | 115.49 | 41.8 | 1,971 | 4 | 3 | 482 | 1,275 | 269 | | | Chr | 15 | NC_005114.4 | CM000086.5 | 111.25 | 41.6 | 1,701 | - | 13 | 582 | 1,443 | 285 | | | Chr | 16 | NC_005115.4 | CM000087.5 | 90.67 | 42.2 | 1,671 | - | 1 | 408 | 1,103 | 228 | | | Chr | 17 | NC_005116.4 | CM000088.5 | 90.84 | 42.9 | 1,566 | - | 85 | 590 | 1,287 | 201 | | | Chr | 18 | NC_005117.4 | CM000089.5 | 88.2 | 42.1 | 1,260 | - | 1 | 419 | 989 | 195 | | | Chr | 19 | NC_005118.4 | CM000090.5 | 62.28 | 44.4 | 1,470 | - | 8 | 417 | 984 | 153 | | | Chr | 20 | NC_005119.4 | CM000091.5 | 56.21 | 43.9 | 1,508 | - | 1 | 315 | 1,124 | 267 | | | Chr | X | NC_005120.4 | CM000092.5 | 159.97 | 40.0 | 2,054 | - | 9 | 503 | 1,694 | 575 | | | Chr | Y | NC_024475.1 | CM002824.1 | 3.31 | 39.3 | 42 | - | - | 23 | 60 | 15 | | | | MT | NC_001665.2 | AY172581.1 | 0.02 | 38.6 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 88.16 | 40.3 | 339 | - | 4 | 63 | 446 | 152 | |
Click on chromosome name to open Genome Data Viewer |