Sequence data: | genome assemblies: 908; sequence reads: 599 | (See Genome Assembly and Annotation report) | | Statistics: | median total length (Mb): 2859.97 | median protein count: 122962 | median GC%: 40.4 | NCBI Annotation Release: | 109 |
- Establishment of an eHAP1 human haploid cell line hybrid reference genome assembled from short and long reads. Law WD, et al. Genomics 2020 May
- Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information. Chen Z, et al. Genome Res 2020 Jun
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome. Wenger AM, et al. Nat Biotechnol 2019 Oct
- De novo human genome assemblies reveal spectrum of alternative haplotypes in diverse populations. Wong KHY, et al. Nat Commun 2018 Aug 2
- Long-read sequencing and de novo assembly of a Chinese genome. Shi L, et al. Nat Commun 2016 Jun 30
- De novo assembly and phasing of a Korean human genome. Seo JS, et al. Nature 2016 Oct 13
- Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region. Mohajeri K, et al. Genome Res 2016 Nov
- Assessing structural variation in a personal genome-towards a human reference diploid genome. English AC, et al. BMC Genomics 2015 Apr 11
- Assembling large genomes with single-molecule sequencing and locality-sensitive hashing. Berlin K, et al. Nat Biotechnol 2015 Jun
- Assembly and diploid architecture of an individual human genome via single-molecule technologies. Pendleton M, et al. Nat Methods 2015 Aug
- Centromere reference models for human chromosomes X and Y satellite arrays. Miga KH, et al. Genome Res 2014 Apr
- Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability. Antonacci F, et al. Nat Genet 2014 Dec
- Single haplotype assembly of the human genome from a hydatidiform mole. Steinberg KM, et al. Genome Res 2014 Dec
- Using population admixture to help complete maps of the human genome. Genovese G, et al. Nat Genet 2013 Apr
- Complete haplotype sequence of the human immunoglobulin heavy-chain variable, diversity, and joining genes and characterization of allelic and copy-number variation. Watson CT, et al. Am J Hum Genet 2013 Apr 4
- Independent specialization of the human and mouse X chromosomes for the male germ line. Mueller JL, et al. Nat Genet 2013 Sep
- A mitogenomic phylogeny of living primates. Finstermeier K, et al. PLoS One 2013
- Mapping the human reference genome's missing sequence by three-way admixture in Latino genomes. Genovese G, et al. Am J Hum Genet 2013 Sep 5
- The shared genomic architecture of human nucleolar organizer regions. Floutsakou I, et al. Genome Res 2013 Dec
- DNA template strand sequencing of single-cells maps genomic rearrangements at high resolution. Falconer E, et al. Nat Methods 2012 Nov
More...
Reference genome: 
Homo sapiens GRCh38.p13
Loc
|
Type
|
Name
|
RefSeq
|
INSDC
|
Size (Mb)
|
GC%
|
Protein
|
rRNA
|
tRNA
|
Other RNA
|
Gene
|
Pseudogene
|
---|
| Chr | 1 | NC_000001.11 | CM000663.2 | 248.96 | 42.3 | 11,288 | 17 | 90 | 4,612 | 5,091 | 1,414 | | | Chr | 2 | NC_000002.12 | CM000664.2 | 242.19 | 40.3 | 8,519 | - | 7 | 3,834 | 3,879 | 1,204 | | | Chr | 3 | NC_000003.12 | CM000665.2 | 198.3 | 39.7 | 7,566 | - | 4 | 2,869 | 2,988 | 912 | | | Chr | 4 | NC_000004.12 | CM000666.2 | 190.22 | 38.3 | 4,763 | - | 1 | 2,258 | 2,443 | 806 | | | Chr | 5 | NC_000005.10 | CM000667.2 | 181.54 | 39.5 | 4,892 | - | 17 | 2,263 | 2,603 | 793 | | | Chr | 6 | NC_000006.12 | CM000668.2 | 170.81 | 39.6 | 5,756 | - | 138 | 2,588 | 3,020 | 893 | | | Chr | 7 | NC_000007.14 | CM000669.2 | 159.35 | 40.7 | 5,359 | - | 22 | 2,482 | 2,782 | 913 | | | Chr | 8 | NC_000008.11 | CM000670.2 | 145.14 | 40.2 | 4,157 | - | 4 | 2,018 | 2,172 | 678 | | | Chr | 9 | NC_000009.12 | CM000671.2 | 138.4 | 42.3 | 4,764 | - | 3 | 2,284 | 2,275 | 725 | | | Chr | 10 | NC_000010.11 | CM000672.2 | 133.8 | 41.6 | 5,518 | - | 3 | 2,231 | 2,181 | 643 | | | Chr | 11 | NC_000011.10 | CM000673.2 | 135.09 | 41.6 | 6,800 | - | 13 | 2,543 | 2,920 | 840 | | | Chr | 12 | NC_000012.12 | CM000674.2 | 133.28 | 40.8 | 6,190 | - | 9 | 2,575 | 2,540 | 701 | | | Chr | 13 | NC_000013.11 | CM000675.2 | 114.36 | 40.2 | 2,116 | - | 4 | 1,290 | 1,384 | 475 | | | Chr | 14 | NC_000014.9 | CM000676.2 | 107.04 | 42.2 | 3,590 | - | 18 | 1,746 | 2,061 | 587 | | | Chr | 15 | NC_000015.10 | CM000677.2 | 101.99 | 43.4 | 3,632 | - | 9 | 1,838 | 1,827 | 572 | | | Chr | 16 | NC_000016.10 | CM000678.2 | 90.34 | 45.1 | 4,697 | - | 27 | 1,823 | 1,955 | 486 | | | Chr | 17 | NC_000017.11 | CM000679.2 | 83.26 | 45.3 | 6,269 | - | 33 | 2,298 | 2,461 | 577 | | | Chr | 18 | NC_000018.10 | CM000680.2 | 80.37 | 39.8 | 2,052 | - | 1 | 1,001 | 985 | 301 | | | Chr | 19 | NC_000019.10 | CM000681.2 | 58.62 | 47.9 | 6,944 | - | 6 | 2,001 | 2,494 | 527 | | | Chr | 20 | NC_000020.11 | CM000682.2 | 64.44 | 43.9 | 2,871 | - | - | 1,360 | 1,359 | 343 | | | Chr | 21 | NC_000021.9 | CM000683.2 | 46.71 | 42.2 | 1,291 | 12 | 1 | 715 | 778 | 208 | | | Chr | 22 | NC_000022.11 | CM000684.2 | 50.82 | 47.7 | 2,525 | - | - | 1,034 | 1,186 | 358 | | | Chr | X | NC_000023.11 | CM000685.2 | 156.04 | 39.6 | 3,830 | - | 4 | 1,297 | 2,220 | 913 | | | Chr | Y | NC_000024.10 | CM000686.2 | 57.23 | 45.4 | 335 | - | - | 321 | 583 | 398 | | | | MT | NC_012920.1 | J01415.2 | 0.02 | 44.4 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 183.8 | 44.3 | 7,225 | 33 | 161 | 4,057 | 7,014 | 2,076 | |
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