Buchnera aphidicola
Reference genome: Buchnera aphidicola str. APS (Acyrthosiphon pisum)
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BLAST against Buchnera aphidicola genome, protein
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Links from Taxonomy

ID: 170
Organism ImageBuchnera aphidicola

Aphid endosymbiont

Lineage: Bacteria[22995]; Proteobacteria[7234]; Gammaproteobacteria[2716]; Enterobacterales[478]; Erwiniaceae[52]; Buchnera[1]; Buchnera aphidicola[1]
Buchnera. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the More...

Summary

Sequence data: genome assemblies: 28 (See  Genome Assembly and Annotation report)
Statistics: median total length (Mb): 0.641743
 median protein count: 560
 median GC%: 25.4084

Publications

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 Representative (genome information for reference and representative genomes)

    Reference genome:

    • minus sign  Buchnera aphidicola str. APS (Acyrthosiphon pisum)

      Submitter: Rikken GSC

      Morphology: Gram:Negative

      Environment: TemperatureRange:Mesophilic, Habitat:HostAssociated

      Phenotype: Disease:None

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_002528.1BA000003.20.6426.356433216061
      PlsmpLeuNC_002253.1AP001071.10.0126.77---7-
      PlsmpTrpNC_002252.1AP001070.10.0130.63---4-

    Representative genomes:

    • minus sign  Buchnera aphidicola str. Sg (Schizaphis graminum)

      Submitter: Uppsala Univ.

      Morphology: Gram:Negative

      Environment: TemperatureRange:Mesophilic, Habitat:HostAssociated

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_004061.1AE013218.10.6425.3560330362529

    • minus sign  Buchnera aphidicola str. Bp (Baizongia pistaciae)

      Submitter: Valencia Univ.

      Morphology: Gram:Negative

      Environment: TemperatureRange:Mesophilic, Habitat:HostAssociated

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_004545.1AE016826.10.6225.351733135573
      PlsmpBBp1NC_004555.1AF492591.1025.43---3-

    • minus sign  Buchnera aphidicola str. G002 (Myzus persicae)

      Submitter: University of Miami

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NZ_CP002701.1CP002701.10.6425.4579330362510
      PlsmpLeuNZ_CP002702.1CP002702.10.0126.18---8-

    • minus sign  Buchnera aphidicola BCc

      Submitter: Valencia Univ.

      Morphology: Gram:Negative

      Environment: TemperatureRange:Mesophilic, Habitat:HostAssociated

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_008513.1CP000263.10.4220.136233034013
      PlsmpLeu-BCcNC_011878.1AY438025.10.0127.35---5-

    • minus sign  Buchnera aphidicola (Cinara tujafilina)

      Submitter: Instituto Cavanilles Biodiversidad y Biologia evolutiva.Universidad Valencia

      Morphology: Gram:Negative

      Environment: TemperatureRange:Mesophilic, Habitat:HostAssociated

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_015662.1CP001817.10.4423.0355330342736

    • minus sign  Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)

      Submitter: Yale University

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_017256.1CP002645.10.6425.7572331362011
      PlsmpLeuNC_017257.1CP002646.10.0126.67---7-
      PlsmpTrpNC_017258.1CP002647.1025.83---3-

    • minus sign  Buchnera aphidicola str. Ua (Uroleucon ambrosiae)

      Submitter: Yale University

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_017259.1CP002648.10.6224.1531330358215
      PlsmpLeuNC_017261.1CP002649.10.0125.67---7-
      PlsmpTrpNC_017260.1CP002650.1027.52---42

    • minus sign  Buchnera aphidicola (Aphis glycines)

      Submitter: The Ohio State University

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NZ_CP009253.1CP009253.10.6325.6553331360919
      PlsmpLeuNZ_CP009254.1CP009254.10.0126.46---71
      PlsmpTrpNZ_CP009255.1CP009255.1031.72---2-

    • minus sign  Buchnera aphidicola (Tuberolachnus salignus)
      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr1NZ_LN890285.1LN890285.10.4221.637833034151
      PlsmpLeuNZ_LN890286.1LN890286.10.0123.75---5-
      PlsmpTrpNZ_LN890287.1LN890287.1021.22---2-

    • minus sign  Buchnera aphidicola (Schlechtendalia chinensis)

      Submitter: School of Life Sciences, Fudan University, Shanghai, China

      Environment: OptimumTemperature: C

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NZ_CP011299.1CP011299.10.6125.8511331357022

    • minus sign  Buchnera aphidicola (Diuraphis noxia)
      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NZ_CP013259.1CP013259.10.6425.5562330361517

    • minus sign  Buchnera aphidicola (Cinara pseudotaxifoliae)
      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr1NZ_LT635893.1LT635893.10.4524.137033034115
      PlsmpLeuNZ_LT635894.1LT635894.10.0128.25---5-
      PlsmpTrpNZ_LT635895.1LT635895.1036.12---2-

    • minus sign  Buchnera aphidicola (Cinara confinis)
      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr1NZ_LT667503.1LT667503.10.4424.037233134167
      PlsmpLeuTrpNZ_LT667504.1LT667504.10.0126.97---7-

    • minus sign  Buchnera aphidicola BCifornacula_v1.0
      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr1NZ_LT667500.1LT667500.10.4528.136933034116
      PlsmpLeuNZ_LT667501.1LT667501.10.0131.35---5-
      PlsmpTrpNZ_LT667502.1LT667502.1046.22---31

Dendrogram (based on genomic BLAST)

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