Yersinia pestis
Reference genome: Yersinia pestis CO92
Download sequences in FASTA format for genome, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Yersinia pestis genome, protein
All 369 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Format

Send to:

Choose Destination

Links from PubMed

ID: 153
Organism ImageYersinia pestis

Causative agent of plague

Lineage: Bacteria[21807]; Proteobacteria[6727]; Gammaproteobacteria[2539]; Enterobacterales[447]; Yersiniaceae[47]; Yersinia[19]; Yersinia pseudotuberculosis complex[4]; Yersinia pestis[1]
Yersinia. This genus consists of 11 species, 3 of which are human pathogens. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. These PAIs may be carried on extrachromosomal plasmids or on the chromosome. One key virulence plasmid More...

Summary

Sequence data: genome assemblies: 369; sequence reads: 6 (See  Genome Assembly and Annotation report)
Statistics: median total length (Mb): 4.57141
 median protein count: 3993
 median GC%: 47.6

Publications

More...

 Representative (genome information for reference and representative genomes)

    Reference genome:

    • minus sign  Yersinia pestis CO92

      Submitter: Sanger Institute

      Human Pathogen

      Morphology: Gram:Negative, Shape:Bacilli

      Environment: OxygenReq:Facultative, OptimumTemperature:28-30, TemperatureRange:Mesophilic, Habitat:Multiple

      Phenotype: Disease:Bubonic plague

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_003143.1AL590842.14.6547.63,7981970144,012112
      PlsmpCD1NC_003131.1AL117189.10.0744.871--11024
      PlsmpMT1NC_003134.1AL117211.10.150.2101---1073
      PlsmpPCP1NC_003132.1AL109969.10.0145.39---9-

Dendrogram (based on genomic BLAST)

Supplemental Content

Tools

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center