Drosophila yakuba
Representative genome: Drosophila yakuba (assembly dyak_caf1)
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BLAST against Drosophila yakuba genome

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ID: 148
Drosophila yakuba

The fruit fly Drosophila yakuba is a member of the melanogaster group of the subgenus Sophophora

Lineage: Eukaryota[2419]; Metazoa[811]; Ecdysozoa[376]; Arthropoda[288]; Hexapoda[252]; Insecta[249]; Pterygota[249]; Neoptera[245]; Holometabola[213]; Diptera[110]; Brachycera[70]; Muscomorpha[69]; Ephydroidea[35]; Drosophilidae[33]; Drosophila[30]; Sophophora[21]; melanogaster group[16]; melanogaster subgroup[5]; Drosophila yakuba[1]
The fruit fly Drosophila yakuba represents a line derived from a single inseminated female collected by D. Lachaise in 1983. This fruit fly arises from a wild population in the Taï rainforest, located on the border between Liberia and Ivory Coast. The species is closely-related to D. melanogaster.D. yakuba is a member of the melanogaster More...

Summary

Submitter: FlyBase
Assembly level: Chromosome
Assembly: GCA_000005975.1 dyak_caf1 scaffolds: 8,123 contigs: 13,441 N50: 115,562 L50: 275
BioProjects: PRJNA29999, PRJNA12366
Whole Genome Shotgun (WGS): INSDC: AAEU00000000.2
Statistics: total length (Mb): 165.71
 protein count: 23317
 GC%: 42.3955

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
NucChrXNC_011091.1CM000162.221.7743.33,338-271722,22730
NucChr2LNT_167062.1CM000157.222.3242.94,1912701742,84924
NucChr2RNT_167063.1CM000158.221.1443.34,31215733233,00927
NucChr3LNT_167064.1CM000159.224.242.54,388-501842,96652
NucChr3RNT_167065.1CM000160.228.8343.35,384-822423,67447
NucChr4NC_011090.1CM000161.21.3735.5331--1892-
MTChrMTNC_001322.1X03240.10.01601921.413222-13-
Un-.-46.0640.91,36029811,24977


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