Cricetulus griseus (ID 2791) - Genome

Cricetulus griseus (Chinese hamster)
Representative genome: Cricetulus griseus (assembly CriGri-PICRH-1.0)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Cricetulus griseus genome, transcript, protein
All 6 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

Links from Gene

ID: 2791

Organism Overview ; Genome Assembly and Annotation report [6] ; Organelle Annotation Report [1]

Cricetulus griseus (Chinese hamster)

The Chinese hamster is a rodent found in the deserts of northern China and Mongolia

Lineage: Eukaryota[15558]; Metazoa[7784]; Chordata[3583]; Craniata[3548]; Vertebrata[3548]; Euteleostomi[3503]; Mammalia[873]; Eutheria[699]; Euarchontoglires[338]; Glires[143]; Rodentia[134]; Myomorpha[82]; Muroidea[77]; Cricetidae[37]; Cricetinae[4]; Cricetulus[1]; Cricetulus griseus[1]

The Chinese hamster ( Cricetulus griseus) is a rodent found in the deserts of northern China and Mongolia. The Chinese hamster ovary (CHO) cell line, which is widely used in biomedical research today, was isolated from this species.
Summary
Sequence data: genome assemblies: 6; sequence reads: 2 (See Genome Assembly and Annotation report)
Statistics: median total length (Mb): 2363.38
median protein count: 37534
median GC%: 41.5142
NCBI Annotation Release: 104
Publications (limited to 20 most recent records)
De novo assembly and annotation of the CHOZN® GS(-/-) genome supports high-throughput genome-scale screening. Kretzmer C, et al. Biotechnol Bioeng 2022 Dec
Chromosome-scale scaffolds for the Chinese hamster reference genome assembly to facilitate the study of the CHO epigenome. Hilliard W, et al. Biotechnol Bioeng 2020 Aug
A reference genome of the Chinese hamster based on a hybrid assembly strategy. Rupp O, et al. Biotechnol Bioeng 2018 Aug
Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome. Lewis NE, et al. Nat Biotechnol 2013 Aug
Chinese hamster genome sequenced from sorted chromosomes. Brinkrolf K, et al. Nat Biotechnol 2013 Aug
The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line. Xu X, et al. Nat Biotechnol 2011 Jul 31
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol 2011 Dec 10
The complete nucleotide sequence of Chinese hamster (Cricetulus griseus) mitochondrial DNA. Partridge MA, et al. DNA Seq 2007 Oct
Molecular characterization and expression of heparan-sulfate 6-sulfotransferase. Complete cDNA cloning in human and partial cloning in Chinese hamster ovary cells. Habuchi H, et al. J Biol Chem 1998 Apr 10
More...

Representative (genome information for reference and representative genomes)
Reference genome:
Cricetulus griseus CriGri_1.0
Submitter: Beijing Genomics Institute
Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
MT NC_007936.1 - 0.02 35.8 13 2 22 - 37 -
Un - . - 2,399.77 41.6 37,521 3 436 8,801 31,648 4,273
Chromosomes
Click on chromosome name to open Genome Data Viewer
External Resources
CHO Genome Organization

Genome

Display Settings:

Send to:

Links from Gene

Summary

Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

Chromosomes

External Resources

Supplemental Content

NCBI Resources

Tools

Related information

Recent activity