Microtus ochrogaster (prairie vole)
Representative genome: Microtus ochrogaster (assembly MicOch1.0)
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BLAST against Microtus ochrogaster genome, transcript, protein

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ID: 10848
Organism ImageMicrotus ochrogaster (prairie vole)

The prairie vole is notable for its life-long pair-bonds

Lineage: Eukaryota[2271]; Metazoa[762]; Chordata[329]; Craniata[321]; Vertebrata[321]; Euteleostomi[316]; Mammalia[136]; Eutheria[131]; Euarchontoglires[61]; Glires[30]; Rodentia[28]; Myomorpha[18]; Muroidea[17]; Cricetidae[10]; Arvicolinae[5]; Microtus[2]; Microtus ochrogaster[1]
The prairie vole (Microtus ochrogaster) lives in grassland of the central United States and Canada. This small rodent primarily eats seeds and vegetation. Prairie voles are unusual in that they establish territories during mating season and establish monogamous life-long pair-bonds.

Summary

Submitter: Broad Institute
Assembly level: Chromosome
Assembly: GCA_000317375.1 MicOch1.0 scaffolds: 6,450 contigs: 187,012 N50: 21,250 L50: 29,205
BioProjects: PRJNA210839, PRJNA72443
Whole Genome Shotgun (WGS): INSDC: AHZW00000000.1
Statistics: total length (Mb): 2287.34
 protein count: 30752
 GC%: 42.8312
NCBI Annotation Release:  101

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein tRNA Other RNA Gene Pseudogene
NucChr1NC_022009.1CM001672.1126.6741.91,1881060916137
NucChr2NC_022010.1CM001673.198.4142.81,209838968132
NucChr4NC_022011.1CM001674.192.9943.51,44711361,035107
NucChr5NC_022012.1CM001675.196.4443.61,5649381,204157
NucChr6NC_022013.1CM001676.188.2943.0866193266994
NucChr7NC_022014.1CM001677.185.145.82,05757421,523110
NucChr8NC_022015.1CM001678.188.5744.41,6688411,220114
NucChr10NC_022016.1CM001679.18644.01,239429922110
NucChr15NC_022017.1CM001680.146.0545.189622265358
NucChr16NC_022018.1CM001681.162.6443.3719523063795
NucChr17NC_022019.1CM001682.135.8543.038841429838
NucChr18NC_022020.1CM001683.169.6242.375022356192
NucChr19NC_022021.1CM001684.165.0241.045922341284
NucChr21NC_022022.1CM001685.151.0841.9734282654569
NucChr22NC_022023.1CM001686.134.8443.943141434534
NucChr24NC_022024.1CM001687.137.1642.039631128030
NucChr26NC_022025.1CM001688.115.4340.3120179224
NucChrXNC_022026.1CM001689.161.8140.7550337521171
NucLinkageGroupLG1NC_022027.1CM001690.158.0241.775452357779
NucLinkageGroupLG2NC_022028.1CM001691.154.8643.890132162242
NucLinkageGroupLG3NC_022029.1CM001692.148.0441.137131635671
NucLinkageGroupLG4NC_022030.1CM001693.166.5442.5921423731103
NucLinkageGroupLG5NC_022031.1CM001694.166.4941.4622111850065
NucLinkageGroupLG7_11NC_022032.1CM001695.127.2740.927541221726
NucLinkageGroupLG8NC_022033.1CM001696.126.5847.261221841428
NucLinkageGroupLG9NC_022034.1CM001697.141.3641.847521643059
NucLinkageGroupLG10NC_022035.1CM001698.118.739.31141811637
NucLinkageGroupLG12NC_022036.1CM001699.15.5639.960--579
Un-.-631.9642.88,9661302977,4391,019

Chromosomes

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