Subdoligranulum variabile
Representative genome: Subdoligranulum variabile DSM 15176
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BLAST against Subdoligranulum variabile genome, protein

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ID: 980
Subdoligranulum variabile

Normal gastrointestinal bacterium

Lineage: Bacteria[20978]; Firmicutes[3302]; Clostridia[1446]; Clostridiales[1332]; Ruminococcaceae[266]; Subdoligranulum[2]; Subdoligranulum variabile[1]
Subdoligranulum variabile. Subdoligranulum variabile is a member of the division Firmicutes. In one comprehensive 16S rDNA sequence-based enumeration of the colonic microbiota of three healthy adult humans, it represents, on average, 0.532% of all 16S rDNA sequences and 1.048% of the sequences in its division (Eckburg et. al. (2005)).

Summary

Submitter: Washington University Genome Sequencing Center
Assembly level: Scaffold
Morphology: Gram:Negative, Motility:No
Environment: OxygenReq:Anaerobic, OptimumTemperature:37, TemperatureRange:Mesophilic, Habitat:HostAssociated
Assembly: GCA_000157955.1 ASM15795v1 scaffolds: 11 contigs: 91 N50: 166,480 L50: 6
BioProjects: PRJNA18181
Whole Genome Shotgun (WGS): RefSeq: NZ_ACBY00000000.2; INSDC: ACBY00000000.2
Statistics: total length (Mb): 3.24547
 protein count: 2931
 GC%: 57.9

Genome Assembly Annotation

Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
master WGSNZ_ACBY00000000.2ACBY00000000.23.2557.92,93176163,114109


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