Gallus gallus (chicken)
Reference genome: Gallus gallus (assembly Gallus_gallus-5.0)
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BLAST against Gallus gallus genome

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ID: 111
Organism ImageGallus gallus (chicken)

The red junglefowl or domestic chicken

Lineage: Eukaryota[2582]; Metazoa[855]; Chordata[366]; Craniata[358]; Vertebrata[358]; Euteleostomi[352]; Archelosauria[101]; Archosauria[96]; Dinosauria[92]; Saurischia[92]; Theropoda[92]; Coelurosauria[92]; Aves[92]; Neognathae[89]; Galloanserae[12]; Galliformes[8]; Phasianidae[5]; Phasianinae[1]; Gallus[1]; Gallus gallus[1]
The chicken is a domesticated form of the red junglefowl (Gallus gallus) that is native to Asia. The chicken is an important agricultural animal and has served as a model organism in many areas of biomedical research; it is one of the primary models for embryology and development, the study of viruses, and cancer. The chicken genome is less than More...

Summary

Submitter: International Chicken Genome Consortium
Assembly level: Chromosome
Assembly: GCA_000002315.3 Gallus_gallus-5.0 scaffolds: 23,870 contigs: 24,693 N50: 2,894,815 L50: 110
BioProjects: PRJNA10808, PRJNA13342, PRJNA10807
Whole Genome Shotgun (WGS): INSDC: AADN00000000.5
Statistics: total length (Mb): 1230.26
 protein count: 46393
 GC%: 42.9197
NCBI Annotation Release:  103

Publications

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Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
Chr1NC_006088.4CM000093.4196.240.35,638-411,2742,96217
Chr2NC_006089.4CM000094.4149.5640.03,687-498951,9454
Chr3NC_006090.4CM000095.4111.340.23,241-188851,7154
Chr4NC_006091.4CM000096.491.2840.22,990-47791,5475
Chr5NC_006092.4CM000097.459.8341.32,734-115921,2953
Chr6NC_006093.4CM000098.435.4742.01,638-34287245
Chr7NC_006094.4CM000099.436.9541.71,700-214116992
Chr8NC_006095.4CM000100.429.9642.21,560-23557093
Chr9NC_006096.4CM000101.424.0943.31,310123196155
Chr10NC_006097.4CM000102.420.4443.61,117-143465833
Chr11NC_006098.4CM000103.420.2242.7931-11189484-
Chr12NC_006099.4CM000104.419.9543.71,041-1262482-
Chr13NC_006100.4CM000105.418.4145.0882-12294989
Chr14NC_006101.4CM000106.415.645.71,114-4258537-
Chr15NC_006102.4CM000107.412.7645.61,003-6203462-
Chr16NC_006103.4CM000108.40.6554.0194-22531155
Chr17NC_006104.4CM000109.410.9648.2881-21873901
Chr18NC_006105.4CM000110.411.0547.3907-13203405-
Chr19NC_006106.4CM000111.49.9847.3876-2173410-
Chr20NC_006107.4CM000112.414.1146.3903-22634722
Chr21NC_006108.4CM000113.46.8648.0696--1133042
Chr22NC_006109.4CM000114.44.7347.6304-1611743
Chr23NC_006110.4CM000115.45.7951.2600--96284-
Chr24NC_006111.4CM000116.46.2849.5543--127226-
Chr25NC_006112.3CM000124.42.9155.0564-2753122
Chr26NC_006113.4CM000117.45.3152.4732-31353261
Chr27NC_006114.4CM000118.45.6652.2704-161294303
Chr28NC_006115.4CM000119.44.9753.1743-4112371-
Chr30NC_028739.1CM003637.10.0265.66---6-
Chr31NC_028740.1CM003638.10.0553.55---5-
Chr32NC_006119.3CM000120.30.0863.721--117-
Chr33NC_008465.3CM000123.41.6556.0234-1411411
ChrWNC_006126.4CM000121.45.1645.766--16504
ChrZNC_006127.4CM000122.482.3141.02,040-25141,13711
groupLGE64NC_008466.3CM000367.30.947.2159--2966-
MTNC_001323.1X52392.10.0246.013222-13-
Un-.-208.848.34,616-217264,151137

Chromosomes

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