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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
Y RP11-414C23 C Yp11.3(FHCRC)
chrY 2Mb A M E  
Y RP11-4D2 C Yp11.3(FHCRC)
chrY 2Mb   M    
Y RP11-400O10 C Yp11.2~11.3(FHCRC)
chrY 2Mb A     multiple_placements_on_genome
Y RP11-400O10 C Yp11.2~11.3(FHCRC)
chrY 2Mb A     multiple_placements_on_genome
Y RP11-115H13 CR Yp11.2(FHCRC)
Yp11.31b~11.31a(NCI)
chrY 6Mb A M E  
Y RP11-375P13 R Yp11.2j~11.2h(NCI)
chrY 8Mb A   E  
Y RP11-91N9 C Yq11.21(FHCRC)
chrY 12Mb     E  
Y RP11-91P9 Yq11.21(FHCRC)
chr6 26Mb     E  
Y RP11-20H21 C Yq11.2(FHCRC)
chrY 19Mb   M E  
Y RP11-24F18 C Yq11.2(FHCRC)
chrY 21Mb   M E  
Y RP11-71M14 C Yq11.2(FHCRC)
chrY 15Mb   M E  
Y RP11-91A13 C Yq11.2(FHCRC)
chrY 16Mb   M E  
Y RP11-26B12 C Yq11.2~12(FHCRC)
chrY 25Mb   M E  
Y RP11-135H9 C Yq11.22(FHCRC)
chrY 17Mb   M E  
Y RP11-236J18 C Yq11.22(FHCRC)
chr8 80Mb   M E multiple_placements_on_genome
Y RP11-236J18 C Yq11.22(FHCRC)
chrY 19Mb   M E multiple_placements_on_genome
Y RP11-256K9 C Yq11.22(FHCRC)
chrY 21Mb A M    
Y RP11-65G9 C Yq11.22(FHCRC)
chrY 21Mb A M E  
Y RP11-214M24 CR Yq11.223d~11.223e(NCI)
Yq11.23(FHCRC)
chrY 25Mb A   E multiple_placements_on_genome
Y RP11-214M24 CR Yq11.223d~11.223e(NCI)
Yq11.23(FHCRC)
chrY 25Mb A   E multiple_placements_on_genome
Y RP11-140H23 C Yq11.23(FHCRC)
chrY 25Mb A M E multiple_placements_on_genome
Y RP11-140H23 C Yq11.23(FHCRC)
chrY 23Mb A M E multiple_placements_on_genome
Y RP11-185N10 C Yq11.23(FHCRC)
chrY 21Mb   M E  
Y RP11-5C5 C Yq11.23(FHCRC)
    A M E  
Y RP11-80F8 C Yq12(FHCRC)
chrY 57Mb     E  
Y RP11-88F4 C Yq12(FHCRC)
chrY 57Mb     E  
total22C:20 R:3 S:02221 91519 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag
 A, insert sequence
 M, STS marker
 E, BAC-end sequence(s)