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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones


FISH chr: FISH data source:
Clone distributor:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
17 CTB-68F18 17pter(UChicago)
           
17 RP11-294J5 R 17p13.3g(NCI)
chr17 1Mb   M E  
17 CTB-11O23 R 17p13.3(CSMC)
chr17 2Mb A M    
17 RP11-26N16 C 17p13.3(FHCRC)
chr17 0Mb   M E  
17 RP11-847E16 C 17p13.3(FHCRC)
chr17 3Mb     E  
17 CTB-16B3 R 17p13(CSMC)
chr17 0Mb   M    
17 CTB-41I6 R 17p13(CSMC)
chr17 8Mb A M    
17 CTB-44J6 R 17p13(CSMC)
chr17 5Mb A M    
17 CTB-61O15 R 17p13(CSMC)
      M    
17 CTD-2075J8 C 17p13(FHCRC)
           
17 RP11-147K16 C 17p13(FHCRC)
chr17 3Mb A   E  
17 RP11-208J12 C 17p13(FHCRC)
chr17 3Mb     E  
17 RP11-216P6 C 17p13(FHCRC)
chr17 0Mb A      
17 RP11-356I18 C 17p13(FHCRC)
chr17 0Mb A   E  
17 RP11-433M14 C 17p13(FHCRC)
chr17 1Mb A M E  
17 RP11-4F24 C 17p13(FHCRC)
chr17 1Mb A M    
17 RP11-582C6 C 17p13(FHCRC)
chr17 2Mb     E  
17 RP11-61B16 C 17p13(FHCRC)
chr17 0Mb   M E  
17 RP11-629C16 C 17p13(FHCRC)
chr17 0Mb     E  
17 RP11-818O24 C 17p13(FHCRC)
chr17 1Mb A      
17 RP11-89D11 C 17p13(FHCRC)
chr17 7Mb   M E  
17 RP11-91C8 C 17p13(FHCRC)
chr17 0Mb   M E  
17 RP11-542C16 C 17p12~13(FHCRC)
chr17 7Mb A      
17 RP11-55C13 C 17p12~13(FHCRC)
chr17 8Mb A M E  
17 RP11-746E8 R 17p(UCSF)
chr17 12Mb A M E  
17 RP11-357O7 R 17p13.3d(NCI)
chr17 1Mb   M E  
17 RP11-380H7 R 17p13.3a(NCI)
chr17 2Mb A M E  
17 RP11-545O6 R 17p13.2b~13.2c(NCI)
chr17 3Mb   M E  
17 RP11-104O19 C 17p13.2(FHCRC)
chr17 4Mb A   E  
17 RP11-135N5 C 17p13.2(FHCRC)
chr17 2Mb A M E  
17 RP11-587F22 C 17p13.2(FHCRC)
chr17 3Mb A      
17 RP11-459C13 R 17p13.2b(NCI)
chr17 3Mb A M E  
17 RP11-457I18 R 17p13.2a(NCI)
chr17 5Mb   M E  
17 RP11-61B20 C 17p13.1(FHCRC)
chr17 6Mb   M E  
17 RP11-9A21 C 17p13.1(FHCRC)
chr17 7Mb   M E  
17 RP11-383G9 R 17p13.1a(NCI)
chr17 8Mb   M E  
17 CTA-402D5 R 17p12(CSMC)
chr17 10Mb   M    
17 CTD-2008I6 R 17p12(UCSF)
chr17 7Mb     E  
17 CTD-2057P19 R 17p12(UCSF)
        E  
17 CTD-2148K8 C 17p12(FHCRC)
        E  
17 CTD-2237N10 R 17p12(UCSF)
chr17 0Mb     E  
17 CTD-2243F16 R 17p12(UCSF)
        E  
17 CTD-2277N1 R 17p12(UCSF)
           
17 CTD-2281O3 R 17p12(UCSF)
chr17 6Mb     E  
17 RP11-104G23 C 17p12(FHCRC)
chr17 11Mb A M E  
17 RP11-104H15 C 17p12(FHCRC)
chr17 7Mb A   E  
17 RP11-1099M24 C 17p12(FHCRC)
chr17 7Mb A   E  
17 RP11-1D5 C 17p12(FHCRC)
chr17 7Mb A M E  
17 RP11-42F12 C 17p12(FHCRC)
chr17 14Mb A M E  
17 RP11-78J16 C 17p12(FHCRC)
chr17 14Mb     E  
17 RP11-89A15 C 17p12(FHCRC)
chr17 8Mb A M E  
17 RP11-89K6 C 17p12(FHCRC)
chr17 13Mb     E  
17 RP11-465O5 C 17p11.2~12(FHCRC)
chr17 15Mb     E  
17 RP11-89F21 C 17p11.2~12(FHCRC)
chr17 15Mb     E  
17 RP11-90G21 C 17p11.1~12(FHCRC)
chr17 15Mb     E  
17 RP11-385G5 R 17p12c(NCI)
chr17 11Mb   M E  
17 RP11-459E6 R 17p12a(NCI)
chr17 15Mb   M E  
17 RP11-404D6 R 17p11.2i(NCI)
chr17 16Mb   M E  
17 RP11-160E2 C 17p11.2(FHCRC)
chr17 18Mb A   E  
17 RP11-273K13 C 17p11.2(FHCRC)
chr17 15Mb A   E  
17 RP11-369K5 C 17p11.2(FHCRC)
chr17 19Mb A M    
17 RP11-434D2 C 17p11.2(FHCRC)
chr17 20Mb A      
17 RP11-64J19 C 17p11.2(FHCRC)
chr17 21Mb A M E  
17 RP11-525O11 R 17p11.2g~11.2h(NCI)
chr17 17Mb   M E  
17 RP11-363P3 R 17p11.2c(NCI)
chr17 20Mb   M E  
17 RP11-405P10 R 17p11.2a(NCI)
chr17 20Mb   M E  
17 RP11-79O4 C 17p11.1~17q11.1(FHCRC)
chr17 19Mb     E  
17 RP11-1107G21 C 17q11.1~11.2(FHCRC)
chr17 26Mb     E  
17 RP11-299G20 C 17q11.1~11.2(FHCRC)
chr17 22Mb A   E  
17 RP11-357J12 C 17q11.1~11.2(FHCRC)
chr17 24Mb A   E  
17 RP11-403E9 C 17q11.1~11.2(FHCRC)
chr17 25Mb A      
17 RP11-746M1 C 17q11.1~11.2(FHCRC)
chr17 20Mb A   E  
17 RP11-876L22 C 17q11.1~11.2(FHCRC)
chr17 26Mb     E  
17 CTA-400E3 R 17q11.2(CSMC)
chr17 22Mb   M    
17 CTA-571F2 R 17q11.2(CSMC)
chr17 27Mb   M    
17 CTB-44L10 R 17q11.2(CSMC)
chr17 30Mb   M    
17 CTB-7B2 R 17q11.2(CSMC)
chr17 26Mb   M    
17 CTB-7H10 R 17q11.2(CSMC)
chr17 25Mb   M    
17 CTB-9N20 R 17q11.2(CSMC)
chr17 25Mb   M    
17 RP11-100L12 C 17q11.2(FHCRC)
chr17 25Mb   M E  
17 RP11-321A17 C 17q11.2(FHCRC)
chr17 24Mb A   E  
17 RP11-466A19 C 17q11.2(FHCRC)
chr17 27Mb A   E  
17 RP11-73F15 C 17q11.2(FHCRC)
chr17 26Mb   M E  
17 RP11-88B16 C 17q11.2(FHCRC)
chr17 25Mb A   E  
17 RP11-142O6 C 17q11.2~12(FHCRC)
chr17 26Mb A   E  
17 RP11-521P1 CS 17q11.2(SC)
17q12(FHCRC)
chr17 29Mb A      
17 RP11-79O9 C 17q11.2~12(FHCRC)
chr17 27Mb     E  
17 RP11-19G24 S 17q11.2~21.1(SC)
chr17 32Mb A   E  
17 RP11-490L18 S 17q11.2~21.1(SC)
chr17 28Mb     E  
17 RP11-38L14 S 17q11.2~21.31(SC)
chr17 35Mb   M E  
17 RP11-525H19 R 17q11.2c(NCI)
chr17 26Mb   M E  
17 RP11-398A1 R 17q11.2d(NCI)
chr17 26Mb   M E  
17 RP11-451O17 R 17q11.2e(NCI)
chr17 27Mb   M E  
17 CTB-47E12 R 17q12(CSMC)
chr17 38Mb   M    
17 CTD-2019C10 C 17q12(FHCRC)
chr17 34Mb A   E  
17 CTD-2198K13 R 17q12(UCSF)
           
17 CTD-2252O19 R 17q12(UCSF)
chr17 23Mb     E  
17 RP11-1094M14 C 17q12(FHCRC)
chr17 30Mb A   E  
17 RP11-196P12 C 17q12(FHCRC)
chr17 31Mb A   E  
17 RP11-208D7 C 17q12(FHCRC)
           
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
17 RP11-252N11 C 17q12(FHCRC)
chr17 30Mb   M E  
17 RP11-387H17 C 17q12(FHCRC)
chr17 35Mb A      
17 RP11-425G1 C 17q12(FHCRC)
chr17 34Mb A      
17 RP11-451O6 C 17q12(FHCRC)
chr17 26Mb     E  
17 RP11-58O8 C 17q12(FHCRC)
chr17 30Mb   M E  
17 RP11-605F20 C 17q12(FHCRC)
chr17 36Mb A   E  
17 RP11-62N23 C 17q12(FHCRC)
chr17 34Mb A   E  
17 RP11-749I16 C 17q12(FHCRC)
chr17 35Mb A   E  
17 RP11-79K15 C 17q12(FHCRC)
chr17 28Mb     E  
17 RP11-81D5 C 17q12(FHCRC)
chr17 32Mb A   E multiple_placements_on_genome
17 RP11-81D5 C 17q12(FHCRC)
chr17 20Mb A   E multiple_placements_on_genome
17 RP11-90A23 C 17q12(FHCRC)
chr17 28Mb     E  
17 RP11-94L15 C 17q12(FHCRC)
chr17 35Mb A M E  
17 RP11-9B11 C 17q12(FHCRC)
chr17 37Mb A   E  
17 RP11-400F19 C 17q12~21(FHCRC)
chr17 37Mb A      
17 RP11-506G7 C 17q12~21(FHCRC)
chr17 38Mb A      
17 RP11-715K2 C 17q12~21(FHCRC)
chr17 32Mb     E  
17 RP11-87N6 C 17q12~21(FHCRC)
chr17 35Mb   M E  
17 RP11-294G4 R 17q12b(NCI)
chr17 30Mb   M E  
17 CTB-8I17 R 17q21.1(CSMC)
chr17 35Mb   M    
17 RP11-89A22 C 17q21.1(FHCRC)
chr17 36Mb     E  
17 RP11-241H2 C 17q21.1~21.2(FHCRC)
      M E  
17 RP11-29C11 C 17q21.1~21.2(FHCRC)
chr17 36Mb   M E  
17 CTD-2072G7 R 17q21(UCSF)
           
17 CTD-2094C6 C 17q21(UCSF)
17q21.2(FHCRC)
chr17 35Mb     E  
17 CTD-2156K16 C 17q21(FHCRC)
           
17 CTD-2195E27 R 17q21(UCSF)
           
17 CTD-2259P11 R 17q21(UCSF)
chr17 38Mb     E  
17 RP11-209M4 C 17q21(FHCRC)
chr17 39Mb A   E  
17 RP11-242D8 C 17q21(FHCRC)
chr17 38Mb A   E  
17 RP11-266I24 C 17q21(FHCRC)
chr17 38Mb   M E  
17 RP11-52N13 C 17q21(FHCRC)
chr17 40Mb     E  
17 RP11-79O18 C 17q21(FHCRC)
chr17 42Mb     E  
17 RP11-89E22 17q21(FHCRC)
chr10 78Mb     E  
17 RP11-89P18 C 17q21(FHCRC)
chr17 36Mb     E  
17 RP11-91P23 17q21(FHCRC)
chr11 67Mb     E  
17 RP11-948G15 C 17q21(FHCRC)
chr17 38Mb A   E  
17 RP11-9M20 C 17q21(FHCRC)
chr17 40Mb   M    
17 RP11-100E5 C 17q21~22(FHCRC)
chr17 38Mb A   E  
17 RP11-290H9 C 17q21~22(FHCRC)
chr17 42Mb A      
17 RP11-463M16 C 17q21~22(FHCRC)
chr17 44Mb A   E  
17 RP11-472H5 C 17q21~22(FHCRC)
chr17 44Mb A      
17 CTB-9F11 R 17q21.2(CSMC)
chr17 42Mb   M    
17 CTD-2009O18 C 17q21.2(FHCRC)
chr17 35Mb     E  
17 RP11-268H17 C 17q21.2(FHCRC)
chr17 36Mb   M E  
17 RP11-513C18 R 17q21.2a~21.2b(NCI)
chr17 35Mb   M E  
17 RP11-58O9 C 17q21.2(FHCRC)
chr17 35Mb A M E  
17 CTA-625G4 R 17q21.3(CSMC)
chr17 44Mb   M    
17 CTB-56I7 R 17q21.3(CSMC)
chr17 42Mb   M    
17 RP11-110H20 C 17q21.3(FHCRC)
chr17 44Mb   M E  
17 RP11-234J24 C 17q21.3(FHCRC)
chr17 42Mb   M    
17 CTB-43I4 R 17q21.3~22(CSMC)
chr17 47Mb A M    
17 RP11-436J4 R 17q21.31c(NCI)
chr17 39Mb   M E  
17 RP11-510P20 R 17q21.32a(NCI)
chr17 42Mb   M E  
17 RP11-248I3 C 17q21.32(FHCRC)
chr17 41Mb   M E  
17 RP11-36J16 C 17q21.32(FHCRC)
chr17 44Mb   M E  
17 RP11-423H11 R 17q21.32c(NCI)
chr17 43Mb   M E  
17 RP11-379D19 R 17q21.33c(NCI)
chr17 46Mb   M E multiple_placements_on_genome
17 RP11-379D19 R 17q21.33c(NCI)
chrY 57Mb   M E multiple_placements_on_genome
17 CTB-55N22 R 17q22(CSMC)
chr17 50Mb   M    
17 CTD-2177J24 C 17q22(FHCRC)
chr17 50Mb     E  
17 CTD-2241I5 R 17q22(UCSF)
           
17 RP11-1079K10 C 17q22(FHCRC)
chr17 44Mb A   E  
17 RP11-131C4 C 17q22(FHCRC)
chr17 47Mb   M    
17 RP11-143M4 C 17q22(FHCRC)
chr17 47Mb   M E  
17 RP11-166P13 C 17q22(FHCRC)
chr17 52Mb A   E  
17 RP11-189P5 C 17q22(FHCRC)
           
17 RP11-361K8 C 17q22(FHCRC)
chr17 43Mb A   E  
17 RP11-42M14 C 17q22(FHCRC)
chr17 47Mb   M E  
17 RP11-506D12 C 17q22(FHCRC)
chr17 46Mb A      
17 RP11-515O17 C 17q22(FHCRC)
chr17 50Mb A      
17 RP11-89L2 C 17q22(FHCRC)
chr17 49Mb     E  
17 RP11-142B17 CR 17q22~23(FHCRC)
17q22d~23.1a(NCI)
chr17 54Mb A M E  
17 RP11-506H21 C 17q22~23(FHCRC)
chr17 53Mb A      
17 RP11-481M4 R 17q22d(NCI)
chr17 54Mb   M E  
17 CTB-61P23 R 17q23(CSMC)
chr17 58Mb   M    
17 RP11-118K23 C 17q23(FHCRC)
chr17 55Mb   M    
17 RP11-670E13 R 17q23(UCSF)
chr17 52Mb A   E multiple_placements_on_genome
17 RP11-670E13 R 17q23(UCSF)
chr22 25Mb A   E multiple_placements_on_genome
17 RP11-87N3 C 17q23(FHCRC)
chr17 59Mb A M    
17 RP11-89H15 C 17q23(FHCRC)
chr17 59Mb A   E  
17 RP11-361P13 C 17q23~24(FHCRC)
chr17 59Mb A   E  
17 RP11-721P9 C 17q23~24(FHCRC)
chr17 58Mb A      
17 RP11-89L7 C 17q23~24(FHCRC)
chr17 61Mb     E  
17 RP11-561K8 R 17q23.2c(NCI)
chr17 57Mb   M E  
17 RP11-489G5 R 17q24.1a(NCI)
chr17 60Mb   M E  
17 RP11-81D7 C 17q24.1(FHCRC)
chr17 59Mb     E  
17 CTA-764F6 R 17q24(CSMC)
chr17 70Mb   M    
17 CTD-2153I4 C 17q24(FHCRC)
chr17 64Mb     E  
17 RP11-131H8 C 17q24(FHCRC)
           
17 RP11-350J20 CS 17q24(FHCRC)
    A      
17 RP11-352P21 C 17q24(FHCRC)
chr17 64Mb A   E  
17 RP11-52B5 C 17q24(FHCRC)
chr17 62Mb A M E  
17 RP11-65C22 C 17q24(FHCRC)
chr17 68Mb   M E  
17 RP11-79K13 C 17q24(FHCRC)
chr17 64Mb     E  
17 RP11-90L11 C 17q24(FHCRC)
chr17 65Mb     E  
17 RP11-91M1 C 17q24(FHCRC)
chr17 69Mb     E  
17 RP11-153A23 C 17q24~25(FHCRC)
chr17 73Mb A M E  
17 RP11-225G19 C 17q24~25(FHCRC)
chr17 69Mb   M    
17 RP11-41E12 C 17q24~25(FHCRC)
chr17 68Mb   M E  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
17 RP11-61B11 C 17q24~25(FHCRC)
chr17 71Mb A   E  
17 RP11-84E24 C 17q24~25(FHCRC)
chr17 67Mb A M    
17 RP11-91O17 C 17q24~25(FHCRC)
chr17 69Mb     E  
17 RP11-304I14 R 17q24.2b(NCI)
chr17 63Mb A M    
17 RP11-387O17 R 17q24.2c(NCI)
chr17 63Mb   M E  
17 RP11-293K20 R 17q24.3a(NCI)
chr17 64Mb A M E  
17 RP11-300G13 R 17q24.3b(NCI)
chr17 65Mb   M E  
17 RP11-387C17 R 17q24.3c(NCI)
chr17 68Mb A M E  
17 RP11-319A23 R 17q25.1a(NCI)
chr17 68Mb   M E  
17 CTA-721F9 R 17q25.1(CSMC)
chr17 72Mb   M    
17 RP11-145C11 C 17q25.1(FHCRC)
chr17 70Mb   M    
17 RP11-76G4 C 17q25.1(FHCRC)
chr17 70Mb   M E  
17 RP11-128J1 C 17q25(FHCRC)
chr17 74Mb   M    
17 RP11-165J13 C 17q25(FHCRC)
chr17 74Mb     E  
17 RP11-16C1 C 17q25(FHCRC)
chr17 70Mb A   E  
17 RP11-201E5 C 17q25(FHCRC)
chr17 71Mb   M    
17 RP11-388C12 C 17q25(FHCRC)
chr17 78Mb A      
17 RP11-552F3 C 17q25(FHCRC)
chr17 71Mb A      
17 RP11-559K16 C 17q25(FHCRC)
chr17 74Mb A      
17 RP11-79L19 C 17q25(FHCRC)
chr17 74Mb     E  
17 RP11-806H10 C 17q25(FHCRC)
chr17 73Mb A   E  
17 RP11-84J3 C 17q25(FHCRC)
chr17 74Mb   M    
17 RP11-89B11 C 17q25(FHCRC)
chr17 71Mb     E  
17 RP11-89J11 C 17q25(FHCRC)
chr17 70Mb     E  
17 RP11-399J11 R 17q25.1b~25.1c(NCI)
chr17 70Mb A M E  
17 RP11-526M7 R 17q25.1d(NCI)
chr17 72Mb   M E  
17 RP11-160F4 C 17q25.2(FHCRC)
chr4 28Mb   M E multiple_placements_on_genome
17 RP11-160F4 C 17q25.2(FHCRC)
chr17 75Mb   M E multiple_placements_on_genome
17 RP11-26B13 C 17q25.2~25.3(FHCRC)
chr17 74Mb   M E  
17 RP11-537M14 R 17q25.3a(NCI)
chr17 74Mb   M E  
17 RP11-165M24 C 17q25.3(FHCRC)
chr17 77Mb   M    
17 RP11-46E14 C 17q25.3(FHCRC)
chr17 75Mb   M E  
17 RP11-467J3 R 17q25.3c~25.3d(NCI)
chr17 74Mb   M E  
17 CTB-50C4 17qter(UChicago)
chr17 77Mb   M    
total230C:152 R:72 S:5230213 87113160 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag
 A, insert sequence
 M, STS marker
 E, BAC-end sequence(s)