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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones

FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
11 RP11-295K3 C 11p15.5(FHCRC)
chr11 1Mb AC068580.23   AQ485424.1 T7,
AQ485422.1 SP6
11 RP11-412M16 C 11p15.5(FHCRC)
chr11 0Mb AC093486.1 RH27310 AQ547135.1 SP6  
11 RP11-496I9 C 11p15.5(FHCRC)
chr11 0Mb AC021663.6,
AP006284.2, AC131572.4*u,
11 RP11-89F15 C 11p15.5(FHCRC)
chr11 1Mb AC130705.2*u   AQ284680.1 SP6,
AZ517752.1 T7
11 RP11-645I8 CR 11p15.4b(NCI)
chr11 6Mb AC021935.3 SHGC-2070, AFM248XF9 AQ402154.1 T7,
AQ400689.1*u SP6
11 RP11-120E20 CR 11p15.4~15.5(FHCRC)
chr11 3Mb AC060812.15,
SHGC-20653 AQ349931.1 T7,
AQ349928.1 SP6
11 RP11-27N2 C 11p15.4~15.5(FHCRC)
chr11 4Mb AC105936.1   B84732.1 T7,
B84731.1 SP6
11 RP11-364G22 C 11p15.4~15.5(FHCRC)
chr11 5Mb AC019088.4, AC091054.1*u,
11 RP11-21N2 C 11p15(FHCRC)
chr11 7Mb AC013694.3   B84058.1 T7,
AQ008927.1 T7,
B84057.1 SP6
11 RP11-23F23 C 11p15(FHCRC)
chr11 4Mb AC015689.12   AQ013783.1 ,
11 RP11-258P13 C 11p15(FHCRC)
chr11 3Mb AC090804.8   AQ479962.1 T7,
AQ479960.1 SP6
11 RP11-107C21 C 11p14~15(FHCRC)
chr11 18Mb AC084117.6 AA489611 AQ319672.1 SP6,
AQ319673.1 T7
11 RP11-6K5 C 11p14~15(FHCRC)
chr11 20Mb AC025972.6 AA148230    
11 RP11-100N3 CR 11p15.5(FHCRC)
chr11 56Mb AC090924.3,
SHGC-2100, AFM344ZG1 AQ344866.1 SP6,
AQ323218.1 T7
11 RP11-371C18 R 11p15.5b~15.5c(NCI)
chr11 1Mb AC074189.3,
  AQ532043.1 SP6  
11 RP11-152H18 C 11p15.4(FHCRC)
chr11 8Mb AC026853.4,
AA446290 AQ385182.1 SP6  
11 RP11-211E17 C 11p15.4(FHCRC)
chr11 6Mb AC009796.6      
11 RP11-215H5 C 11p15.4(FHCRC)
chr18 21Mb AC021788.5 AA682438    
11 RP11-25D22 C 11p15.4(FHCRC)
chr11 7Mb AC016008.3*u SHGC-30914 AQ013610.1 ,
B83190.1*u T7
11 RP11-290F24 C 11p15.4(FHCRC)
chr11 6Mb AC022762.8 SHGC-2070, AFM248XF9    
11 RP11-30I3 C 11p15.4(FHCRC)
chr11 6Mb AC016441.5*u SHGC-10293 B85175.1 T7,
B85174.1 SP6
11 RP11-399N15 C 11p15.4(FHCRC)
chr11 7Mb AC021427.10      
11 RP11-560B16 C 11p15.4(FHCRC)
chr11 6Mb AC017103.5,
11 RP11-658K18 C 11p15.4(FHCRC)
chr11 5Mb AC026090.5,
11 RP11-715M10 C 11p15.4(FHCRC)
chr11 6Mb AC100875.3   AQ512969.1 T7,
AQ468981.1 SP6
11 RP11-89D4 C 11p15.4(FHCRC)
chr11 7Mb AC060799.6   AQ285729.1 T7,
AQ285727.1*u SP6
11 RP11-171N15 C 11p15.3~15.4(FHCRC)
chr11 121Mb AC019303.3*u AFM302XB9, AFM302XB9*u AQ422628.1*u SP6  
11 RP11-351I24 C 11p15.3~15.4(FHCRC)
chr11 10Mb AC080023.6   AQ532270.1 T7,
AQ532269.1 SP6
11 RP11-438N5 R 11p15.4c(NCI)
chr11 3Mb AC018888.3,
11 RP11-206L19 R 11p15.2~15.3(FHCRC)
chr11 11Mb AC019317.9 SHGC-2092    
11 RP11-39F19 C 11p15.2~15.3(FHCRC)
chr11 14Mb AC103733.1*u SHGC-13168 AQ029429.1 T7,
AQ029427.1 SP6
11 RP11-170H2 C 11p15.2(FHCRC)
chr11 12Mb AC100864.2*u SHGC-2066, SHGC-2066*u AQ413134.1 SP6,
AZ519264.1 T7
11 RP11-21L19 C 11p15.2(FHCRC)
chr11 14Mb AC011084.17 SHGC-2059, AFM166ZE1 B86016.1 SP6  
11 RP11-79N15 C 11p15.2(FHCRC)
chr11 15Mb AC103997.2*u SHGC-6000 AQ285084.1 T7,
AQ285081.1 SP6
11 RP11-7O20 C 11p15.2(FHCRC)
chr11 14Mb AC025730.6,
SHGC-12316 B72260.1 SP6  
11 RP11-98J9 CR 11p15.2(FHCRC)
chr11 13Mb AC027779.10 D11S1348, AFM323VC1 AQ318159.1 SP6,
AQ318162.1 T7
11 RP11-613F22 C 11p15.1~15.2(FHCRC)
chr11 18Mb AC027544.11   AQ366547.1 T7,
AQ369702.1 SP6
11 RP11-13J19 R 11p15.2a(NCI)
chr11 15Mb AC013635.3   B83397.1 SP6,
B76101.1 T7
11 RP11-166E15 C 11p15.1(FHCRC)
chr11 17Mb AC113136.1 SHGC-3156*u AQ382997.1 T7,
AQ382995.1 SP6
11 RP11-81D23 C 11p15.1(FHCRC)
chr11 18Mb AC107948.7 SHGC-32644 AZ521552.1 T7,
AQ318474.1 T7,
AZ521550.1 SP6
11 RP11-2C23 CR 11p14.3~15.1(FHCRC)
chr11 19Mb AC015684.11 SHGC-33456, SHGC-5325, SHGC-972    
11 RP11-11A11 C 11p14~15.1(FHCRC)
chr11 19Mb AC011227.7 SHGC-33456 B73053.1 T7,
B73052.1 SP6
11 RP11-27L6 CR 11p14(FHCRC)
chr11 18Mb AC025620.3   B84717.1 SP6,
B84718.1 T7
11 RP11-16H3 C 11p14(FHCRC)
chr11 26Mb AC018399.4*u SHGC-220, AFM081ZA5 B82509.1 SP6,
B81741.1 T7
11 RP11-1L12 CR 11p14(FHCRC)
chr11 27Mb AC015756.18 SHGC-17501 B63555.1 SP6,
B48419.1 SP6,
B63238.1 T7
11 RP11-215H22 C 11p14(FHCRC)
chr11 29Mb AC021233.9 AFMB314WH1    
11 RP11-651M4 C 11p14(FHCRC)
chr11 27Mb AC068488.2,
  AQ459149.1 T7  
11 RP1-76K20 S 11p13~14.3(SC)
chr11 31Mb AL133376.6      
11 RP1-98H19 S 11p13~14.3(SC)
11 RP5-859D17 S 11p13~14.3(SC)
chr11 29Mb AC087718.1,
11 RP11-265F24 R 11p14.3c(NCI)
chr11 21Mb AC021114.3,
  AQ487106.1 SP6,
AQ487109.1 T7
11 RP11-20J1 R 11p14.3b(NCI)
chr11 25Mb AC013799.6,
  AQ008164.1 SP6,
B88783.1 SP6,
B83841.1 T7
11 RP1-101B2 S 11p13~14.2(SC)
chr11 30Mb AL137160.7      
11 RP1-305K11 S 11p13~14.2(SC)
chr11 29Mb AL138813.8      
11 RP1-319D17 S 11p13~14.2(SC)
chr11 31Mb AL138970.7      
11 RP1-68P15 S 11p13~14.2(SC)
chr11 31Mb AC087715.1,
11 RP4-544K11 S 11p13~14.2(SC)
chr11 30Mb AL133296.11      
11 RP4-664I18 S 11p13~14.2(SC)
chr11 29Mb AC087849.3,
11 RP4-774E4 S 11p13~14.2(SC)
chr11 29Mb AL135933.11      
11 RP5-1137O17 S 11p12~14.2(SC)
chr11 31Mb AL133295.16      
11 RP1-104D14 S 11p13~14.1(SC)
chr11 34Mb AL035554.2      
11 RP1-140L23 S 11p13~14.1(SC)
chr11 30Mb AL133349.7      
11 RP1-296L11 S 11p13~14.1(SC)
chr11 31Mb AL137804.7      
11 RP5-1024C24 S 11p13~14.1(SC)
chr11 30Mb AC090537.2,
11 RP1-130L23 S 11p12~14.1(SC)
chr11 33Mb AL137161.24      
11 RP1-145M24 S 11p12~14.1(SC)
chr11 34Mb AC087717.1,
11 RP1-179L10 S 11p12~14.1(SC)
chr11 34Mb AL138810.10      
11 RP1-220G17 S 11p12~14.1(SC)
chr11 31Mb AC087825.2,
11 RP1-22J9 S 11p12~14.1(SC)
chr11 33Mb AL135799.8, AC091568.1*u      
11 RP1-276E15 S 11p12~14.1(SC)
chr11 35Mb AC087401.1,
11 RP1-89D4 S 11p12~14.1(SC)
chr11 33Mb AL136126.34      
11 RP4-535H23 S 11p12~14.1(SC)
chr11 30Mb AL135932.7, AC087504.1*u      
11 RP4-592P18 S 11p12~14.1(SC)
chr11 35Mb AL137863.15, AC087405.1*u      
11 RP4-683L5 S 11p12~14.1(SC)
chr11 35Mb AC090625.5,
11 RP5-1002E13 S 11p12~14.1(SC)
chr11 34Mb AC087661.2,
11 RP5-1135K18 S 11p12~14.1(SC)
chr11 34Mb AC087531.3,
11 RP5-874H1 S 11p12~14.1(SC)
chr11 30Mb AC087658.2,
11 RP5-875K15 S 11p12~14.1(SC)
chr11 34Mb AL157952.8, AC090626.3*u      
11 RP11-685B11 R 11p14.1b(NCI)
chr11 30Mb AC020695.4   AQ432626.1*u SP6  
11 RP1-127L3 S 11p13(SC)
chr11 32Mb AL096793.20      
11 RP1-17K7 S 11p13(SC)
chr11 31Mb AL035078.32      
11 RP1-181J22 S 11p13(SC)
chr11 32Mb AL049714.6      
11 RP1-247C2 S 11p13(SC)
chr11 32Mb AL049713.20      
11 RP1-259N9 S 11p13(SC)
chr11 32Mb AC087653.6,
11 RP1-305G21 S 11p13(SC)
chr11 33Mb AL133399.1      
11 RP1-316D7 S 11p13(SC)
chr11 33Mb AC135057.1,
11 RP1-61M11 S 11p13(SC)
chr11 32Mb AL109624.11      
11 RP1-65P5 S 11p13(SC)
chr11 32Mb AL078612.8      
11 RP1-74J1 S 11p13(SC)
chr11 32Mb AL049692.13      
11 RP1-8L15 S 11p13(SC)
chr11 33Mb AC090722.1,
11 RP4-541C22 S 11p13(SC)
chr11 33Mb AC090700.1,
11 RP4-760G15 S 11p13(SC)
chr11 32Mb AL079340.7      
11 RP5-1083G3 S 11p13(SC)
chr11 31Mb AL049635.8      
11 RP5-1169J3 S 11p13(SC)
chr11 34Mb AL049652.28, AC090724.3*u      
11 RP1-136N16 S 11p12~13(SC)
chr11 35Mb AL136989.10      
11 RP1-187A11 S 11p12~13(SC)
chr11 33Mb AC087824.4,
11 RP1-53C18 S 11p12~13(SC)
chr11 34Mb AL035079.14      
11 RP1-68D18 S 11p12~13(SC)
chr11 35Mb AL133330.14      
11 RP1-85M6 S 11p12~13(SC)
chr11 32Mb AC087716.1,
11 RP4-594L9 S 11p12~13(SC)
chr11 34Mb AC090624.2,
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
11 RP5-840O13 S 11p12~13(SC)
chr11 35Mb AL354921.12      
11 RP5-916O11 S 11p12~13(SC)
chr11 35Mb AC087659.1,
11 RP11-30D23 R 11p13b(NCI)
chr11 34Mb AC009637.4   B87733.1 T7,
B87732.1 SP6
11 RP11-219O3 C 11p12(FHCRC)
chr11 36Mb AC009656.11      
11 RP11-220C23 C 11p12(FHCRC)
chr11 40Mb AC021824.7 SHGC-47    
11 RP11-72A10 CR 11p12(FHCRC)
chr11 36Mb AC079073.7 SHGC-20671 AQ267094.1 SP6,
AQ267096.1 T7
11 RP11-104M24 C 11p11.2~12(FHCRC)
chr11 44Mb AC103854.2   AQ312970.1 T7,
AQ312969.1 SP6
11 RP4-607I7 S 11p11.2~12(SC)
chr11 34Mb AC087656.3,
11 RP11-541L6 R 11p12b(NCI)
chr11 39Mb AC024244.7, AC087444.1*u   CL423307.1 T7,
CL423302.1 SP6
11 RP11-484D2 R 11p12a(NCI)
chr11 43Mb AC025552.3,
  AQ631765.1 T7,
AQ631763.1 SP6
11 RP11-12C11 CR 11p11.2(FHCRC)
chr11 44Mb AC023340.2, AC091011.1*u AFMA131XD5, SHGC-33775, AFMA131XD5*u, AFMA131XD5*u CL423242.1 SP6,
B75719.1 SP6,
CL423244.1 T7
11 RP11-222G13 C 11p11.2(FHCRC)
chr11 48Mb AC027161.1*u SHGC-6636   multiple_placements_on_genome
11 RP11-222G13 C 11p11.2(FHCRC)
chr11 51Mb AC027161.1*u SHGC-6636   multiple_placements_on_genome
11 RP11-255G5 C 11p11.2(FHCRC)
chr11 44Mb AC068858.10 SHGC-33775    
11 RP11-390K5 C 11p11.2(FHCRC)
chr11 47Mb AC024045.4,
11 RP11-58K22 C 11p11.2(FHCRC)
chr11 44Mb AC010768.10   AQ199196.1 ,
11 RP11-613D13 C 11p11.2(FHCRC)
chr11 43Mb AC068289.4,
  AQ369211.1 SP6  
11 RP11-706A13 C 11p11.2(FHCRC)
chr11 44Mb AC019143.3,
  AQ443124.1*u SP6,
AQ516990.1*u T7
11 RP11-709C9 C 11p11.2(FHCRC)
chr11 48Mb AC026975.5   AQ613169.1 SP6  
11 RP11-750A9 C 11p11.2(FHCRC)
chr11 47Mb AC074195.3      
11 RP11-125F14 C 11p11.1~11.2(FHCRC)
chr11 47Mb AC019059.4,
AA282445 AQ344034.1 SP6,
AQ344036.1 T7
11 RP11-425L10 C 11p11.1~11.2(FHCRC)
chr11 46Mb AC024293.18      
11 RP11-750H9 C 11p11.1~11.2(FHCRC)
chr11 47Mb AC090559.7      
11 RP11-90G1 C 11p11.1~11.2(FHCRC)
chr11 46Mb AC012054.3 AFMB354WC5*u AQ281563.1 SP6,
AZ517919.1 T7,
AQ281566.1 T7
11 RP11-722K13 R 11p11.2a(NCI)
chr11 47Mb AC067943.4,
  AQ513509.1 SP6,
AQ462216.1*u T7
11 RP11-87N22 C 11q12.1(FHCRC)
chr11 112Mb AC009466.17 AFMB293ZG5    
11 RP11-5F17 C 11q12(FHCRC)
chr11 61Mb AC025689.3,
11 RP11-624G17 C 11q12(FHCRC)
chr11 56Mb AP002893.3   AQ371238.1 SP6,
AQ404715.1 T7
11 RP11-691N7 C 11q12(FHCRC)
chr11 57Mb AC090218.3,
  AQ613448.1 SP6,
AQ513291.1 T7
11 RP11-77M17 C 11q12(FHCRC)
chr11 57Mb AC009438.3 SHGC-11920, SHGC-11920*u AQ268897.1 SP6,
AQ268899.1 T7
11 RP11-872D17 C 11q12(FHCRC)
chr11 56Mb AC090319.3,
  AQ827838.1*u T7  
11 RP11-467L20 CR 11q12.2a(NCI)
chr11 61Mb AP002380.3, AC090925.1*u   AQ631090.1 T7,
AQ631089.1 SP6
11 RP11-472L10 C 11q12~13(FHCRC)
chr11 63Mb AC023920.2,
  AQ630400.1 T7  
11 RP11-568F15 C 11q12~13(FHCRC)
chr11 59Mb AC021809.5 AFM284XD9    
11 RP11-660B16 CR 11q12.3b(NCI)
chr11 62Mb AC073228.2 AFM039XG3 AQ611477.1 T7,
AQ611528.1 SP6
11 RP11-729B4 R 11q12~13(UCSF)
chr11 59Mb AC090401.5,
11 RP11-783K16 C 11q12~13(FHCRC)
chr11 63Mb AC099830.1,
  AQ462849.1*u SP6  
11 RP11-881M11 C 11q12~13(FHCRC)
chr11 60Mb AP003721.3      
11 RP11-21B14 R 11q12.1d(NCI)
chr11 59Mb AC013807.9   B85788.1 T7,
B85787.1 SP6
11 RP11-149G19 C 11q13(FHCRC)
chr11 67Mb AC051652.2 AFM289YA9 AQ377019.1 SP6,
AQ377032.1 T7
11 RP11-15L8 C 11q13(FHCRC)
chr11 66Mb AC018798.7,
SHGC-7373 B75370.1 SP6  
11 RP11-169D4 C 11q13(FHCRC)
chr11 71Mb AC026173.3,
11 RP11-300I6 C 11q13(FHCRC)
chr11 69Mb AP001888.4   AQ507379.1 T7,
AQ507376.1*u SP6
11 RP11-527H7 C 11q13(FHCRC)
chr11 66Mb AC019220.3 ACTN3    
11 RP11-548G17 C 11q13(FHCRC)
chr11 64Mb AC055871.3 SHGC-11397    
11 RP11-675B4 C 11q13(FHCRC)
chr11 65Mb AP000822.3 D11S913 AQ518483.1 SP6  
11 RP11-730K20 R 11q13(UCSF)
chr11 64Mb AC090297.2,
  AQ452365.1 T7,
AQ616797.1*u SP6
11 RP11-755I3 C 11q13(FHCRC)
chr11 73Mb AP001104.4      
11 RP11-772K10 C 11q13(FHCRC)
chr11 64Mb AC090316.2,
  AQ453105.1 T7  
11 RP11-809N8 C 11q13(FHCRC)
chr11 72Mb AP000763.5   AQ598348.1 SP6,
AQ710782.1 T7
11 RP11-856B14 C 11q13(FHCRC)
chr11 65Mb AP001362.5      
11 RP11-867O8 R 11q13(UCSF)
chr11 64Mb AC090390.5,
  AQ799912.1*u T7,
AQ818979.1*u SP6
11 RP11-707G14 CR 11q13.4b(NCI)
chr11 73Mb AP002770.3      
11 RP11-727K3 R 11q13.1b(NCI)
chr11 64Mb AC091141.1,
  AQ455842.1 SP6,
AQ456982.1*u T7
11 RP11-20K4 CR 11q13.2a~13.2b(NCI)
chr11 63Mb AC021987.3*d SHGC-9670, SHGC-34148*d, SHGC-14407*u CL423278.1*d T7,
B83851.1*d T7,
CL423276.1*u SP6
11 RP11-20K4 CR 11q13.2a~13.2b(NCI)
chr11 67Mb AC021987.3 SHGC-34148, SHGC-9670*d, SHGC-14407*u CL423278.1 T7,
B83851.1 T7,
CL423276.1*u SP6
11 RP11-569N5 R 11q13.2c(NCI)
chr11 68Mb AC026872.5   CL423311.1 T7  
11 RP11-203N8 R 11q13.3b(NCI)
chr11 69Mb AP001787.2   AQ413618.1 T7,
AQ413617.1 SP6
11 RP11-44J5 CR 11q13.4(FHCRC)
chr11 72Mb AC011077.4 AFMC020YD5 AQ199008.1 ,
11 RP11-456I15 C 11q13.4(FHCRC)
chr11 72Mb AP002993.3 AFM185YA1 AQ582715.1 SP6  
11 RP11-715F10 C 11q13.4(FHCRC)
chr11 67Mb AP001184.4   AQ437025.1*u T7  
11 RP11-757C15 C 11q13.4(FHCRC)
chr11 71Mb AP000719.4      
11 RP11-672A2 C 11q13.4~13.5(FHCRC)
chr11 75Mb AP001189.5 GARP AQ464055.1*u T7,
AQ610115.1*u SP6
11 RP11-15C6 R 11q13.4c(NCI)
chr11 74Mb AC011686.3   B82387.1 SP6,
B82388.1 T7,
B75289.1 T7
11 RP11-115O9 C 11q13.5~14.1(FHCRC)
chr11 76Mb AC023915.2 AFMB359WH1 AQ344562.1 SP6,
AQ344564.1 T7
11 RP11-111M22 R 11q13.5b(NCI)
chr11 75Mb AP002360.4   AQ351458.1 T7,
AQ322945.1 SP6
11 RP11-19P3 C 11q14.1(FHCRC)
chr11 84Mb AC019020.4 AFM338XE1, AFM338XE1*u B88382.1 SP6,
B92157.1 T7
11 RP11-1E8 CR 11q14.1(FHCRC)
chr11 81Mb AC021245.2 SHGC-219, D11S901 B47679.1 T7,
AQ312928.1 SP6
11 RP11-7H7 CR 11q14.1(FHCRC)
chr11 78Mb AP002412.1 SHGC-12273 B71312.1 SP6,
AZ520008.1 T7
11 RP11-90K17 C 11q14.1(FHCRC)
chr11 85Mb AC016486.4,
AP003128.2, AC009664.5*u
  AQ283689.1 SP6,
AQ283693.1 T7
11 RP11-12D16 C 11q14(FHCRC)
chr11 85Mb AC013370.5,
  B75737.1 SP6,
B75738.1 T7
11 RP11-342A16 C 11q14(FHCRC)
chr11 83Mb AC067758.2 AFM311WH5*u    
11 RP11-345O18 C 11q14(FHCRC)
chr11 86Mb AP002890.1   AQ539371.1 SP6,
AQ539372.1 T7
11 RP11-727A23 C 11q14(FHCRC)
chr11 82Mb AP000873.5   AQ455797.1 SP6  
11 RP11-796A5 C 11q14(FHCRC)
chr11 88Mb AP000720.4   AQ722334.1 SP6,
AQ514668.1*u T7
11 RP11-876F8 R 11q14(UCSF)
chr11 87Mb AP000795.5   AQ812914.1 SP6,
AQ799946.1*u T7
11 RP11-236L3 C 11q14~21(FHCRC)
chr11 93Mb AP001886.3   AQ479457.1 SP6,
AQ479459.1 T7
11 RP11-712B9 C 11q14~21(FHCRC)
chr11 94Mb AP000787.5   AQ613842.1 T7  
11 RP11-254C5 CR 11q14.1~14.2(FHCRC)
chr11 127Mb AP001829.4 AFM324ZH9, SHGC-2094 AQ478282.1 T7,
AQ478281.1 SP6
11 RP11-266G4 R 11q14.1b(NCI)
chr11 79Mb AP001926.2   AQ489999.1 SP6,
AQ490001.1 T7
11 RP11-118L16 R 11q14.1d(NCI)
chr11 83Mb AC018708.5 SHGC-8474 AQ349776.1 SP6,
AQ349778.1 T7
11 RP11-131C11 CR 11q14.1e(NCI)
chr11 84Mb AC011768.4 SHGC-36010    
11 RP11-91E22 C 11q14.3(FHCRC)
chr11 87Mb AC022014.3   AQ285535.1 SP6,
AQ285547.1 T7
11 RP11-372E19 R 11q14.3d(NCI)
chr11 91Mb AC025820.4,
  AQ550157.1 SP6,
AQ528055.1 T7
11 RP11-13L14 C 11q21(FHCRC)
chr11 95Mb AC016860.2 SHGC-9649, SHGC-32290 B76124.1 SP6,
B76125.1 T7
11 RP11-16K5 CR 11q21(FHCRC)
chr11 95Mb AC011875.3 AFM203VG7, SHGC-13733, AFM203VG7*u B75493.1 T7,
B75492.1 SP6
11 RP11-685N10 R 11q21(UCSF)
chr11 93Mb AP000786.4 SHGC-35949 CL423339.1 SP6,
CL423342.1 T7
11 RP11-816P15 R 11q21(UCSF)
chr11 93Mb AP000765.5   AQ562289.1*u T7  
11 RP11-40B14 C 11q22.1(FHCRC)
chr11 99Mb AC026851.3 AFM218YA7, AFM218YA7*u    
11 RP11-130L12 C 11q22(FHCRC)
chr11 106Mb AC024615.2      
11 RP11-179B7 CR 11q22(FHCRC)
chr11 103Mb AC024030.2,
SHGC-17520*u AQ418262.1 SP6,
AQ418264.1 T7
11 RP11-27I22 C 11q22(FHCRC)
chr11 107Mb AP001770.4   B87104.1 SP6,
B87105.1 T7
11 RP11-315O6 C 11q22(FHCRC)
chr11 101Mb AP001830.5   AQ504664.1 SP6,
AZ520625.1 T7,
AQ504667.1 T7
11 RP11-686G6 C 11q22(FHCRC)
chr11 102Mb AP001144.2   AQ465303.1 SP6  
11 RP11-693N9 C 11q22(FHCRC)
chr11 104Mb AP002004.4   AQ434892.1 SP6,
AQ442371.1 T7
11 RP11-750P5 R 11q22(UCSF)
chr11 102Mb AP000922.2 SHGC-11954 CL423205.1 SP6,
CL423209.1*u T7
11 RP11-770N16 R 11q22(UCSF)
chr11 102Mb AP000875.2 sts-X75308, SHGC-8453 AQ453495.1*u SP6  
11 RP11-817J15 R 11q22(UCSF)
chr11 101Mb AP000851.4      
11 RP11-890D8 C 11q22(FHCRC)
chr11 101Mb AP001167.4      
11 RP11-100J10 C 11q22~23(FHCRC)
chr11 112Mb AP001802.3 AFMB293ZG5 AQ311642.1 T7,
AQ345633.1 SP6
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
11 RP11-209E9 C 11q22~23(FHCRC)
chr11 107Mb AC025197.2 SHGC-14706    
11 RP11-284O21 C 11q22~23(FHCRC)
chr11 116Mb AC022760.2      
11 RP11-649M10 C 11q22~23(FHCRC)
chr11 113Mb AC019290.4   AQ437981.1 T7  
11 RP11-775E2 R 11q22.1c(NCI)
chr11 99Mb AP001376.5   AQ520311.1 T7,
AQ514816.1 SP6
11 RP11-236L10 R 11q22.1d(NCI)
chr11 100Mb AP001827.6   AQ480489.1 SP6,
AQ480491.1 T7
11 RP11-2F21 C 11q22.3(FHCRC)
chr11 109Mb AC015772.6*d SHGC-14914, SHGC-34524 B63605.1 T7,
B63604.1 SP6
11 RP11-2F21 C 11q22.3(FHCRC)
chr11 24Mb AC015772.6 SHGC-34524*d, SHGC-14914*d B63604.1*d SP6,
B63605.1*d T7
11 RP11-648J7 R 11q22.3b(NCI)
chr11 105Mb AP001985.5   AQ611884.1 T7,
AQ465252.1 SP6
11 RP11-56J3 R 11q22.3c(NCI)
chr11 107Mb AC015692.3 SHGC-9652 AQ115883.1 ,
11 RP11-3F7 CR 11q23.1(FHCRC)
chr11 111Mb AC010815.6 SHGC-2090, AFM320XH1*u B63364.1 T7,
B63363.1 SP6
11 RP11-64D24 C 11q23.1~23.2(FHCRC)
chr11 113Mb AP002518.3   AQ241000.1 SP6,
AQ241001.1 T7
11 RP11-158I9 C 11q23(FHCRC)
chr11 118Mb AP004609.1 SHGC-2910, SHGC-10796 AQ389896.1*u T7  
11 RP11-215H18 C 11q23(FHCRC)
chr11 117Mb AP001582.4      
11 RP11-356J5 C 11q23(FHCRC)
chr11 111Mb AP002884.5   AQ537648.1 SP6,
AQ537649.1 T7
11 RP11-35P15 C 11q23(FHCRC)
chr11 117Mb AP001554.6 SHGC-6010 AQ046017.1 ,
11 RP11-680A7 C 11q23(FHCRC)
chr11 118Mb AP001557.3   AQ434333.1 SP6,
AQ464510.1*u T7
11 RP11-759M17 R 11q23(UCSF)
chr11 110Mb AP000925.6   AQ451863.1*u T7,
AQ461044.1*u SP6
11 RP11-892K21 C 11q23(FHCRC)
chr11 118Mb AP000854.3      
11 RP11-89P5 C 11q23(FHCRC)
chr11 120Mb AC009641.4   AZ517840.1 T7,
AQ284971.1 T7,
AQ284967.1 SP6
11 RP11-8K10 CR 11q23(FHCRC)
chr11 119Mb AC016849.3 SHGC-13646 B72374.1 SP6,
B72375.1 T7
11 RP11-76P21 R 11q23.1b(NCI)
chr11 110Mb AP002448.3   AQ281815.1 SP6,
AQ281816.1 T7
11 RP11-11C15 CR 11q23.2~23.3(FHCRC)
chr11 122Mb AC021981.2 SHGC-12982 B73074.1 SP6,
B73075.1 T7
11 RP11-799K20 R 11q23.2b(NCI)
chr11 113Mb AC020742.2   CL423237.1 SP6  
11 RP11-356E17 R 11q23.2c~23.3a(NCI)
chr11 115Mb AP001891.4   AQ535047.1 T7,
AQ535046.1 SP6
11 RP11-770J1 R 11q23.3d(NCI)
chr11 117Mb AP001267.4      
11 RP11-344F5 R 11q24.1a~24.1b(NCI)
chr11 121Mb AP001982.4   AQ541868.1 SP6,
AZ521393.1 SP6,
AZ521394.1 T7,
AQ541870.1*u T7
11 RP11-121G24 C 11q24(FHCRC)
chr11 127Mb AC009644.3   AQ343667.1 SP6,
AQ343668.1 T7
11 RP11-158K18 C 11q24(FHCRC)
chr11 120Mb AC010929.2,
  AQ372035.1 T7,
AQ372032.1 SP6
11 RP11-15J15 C 11q24(FHCRC)
chr11 125Mb AC011728.3 SHGC-1011, AFM248WF5 B76493.1 T7,
B76492.1 SP6
11 RP11-164A10 C 11q24(FHCRC)
chr11 123Mb AP001804.5   AQ378330.1 SP6,
AQ378333.1 T7
11 RP11-164B14 C 11q24(FHCRC)
chr11 121Mb AC018619.3,
  AQ380510.1 SP6,
AQ380512.1 T7
11 RP11-197N18 C 11q24(FHCRC)
11 RP11-41K5 C 11q24(FHCRC)
chr11 126Mb AC027255.2*u SHGC-31257    
11 RP11-50B3 C 11q24(FHCRC)
chr11 125Mb AP001893.5 SHGC-1011, AFM248WF5 AQ082452.1 ,
11 RP11-712D22 C 11q24(FHCRC)
chr11 124Mb AP001132.4   AQ440756.1 T7  
11 RP11-744N12 C 11q24(FHCRC)
chr11 128Mb AP001122.5      
11 RP11-762B21 C 11q24(FHCRC)
chr11 122Mb AP000926.6   AQ620473.1 T7  
11 RP11-791J7 C 11q24(FHCRC)
chr11 124Mb AP001494.4   AQ468149.1 T7  
11 RP11-10N17 R 11q24.2a~24.2b(NCI)
chr11 124Mb AC013614.4   B72994.1 SP6,
B72995.1 T7
11 RP11-354O3 R 11q24.3c(NCI)
chr11 130Mb AP001890.2   AZ518009.1 T7,
AQ531254.1 SP6
11 RP11-77C9 R 11q25a(NCI)
chr11 131Mb AP001811.2 SHGC-248 AQ268065.1 T7,
AQ268063.1 SP6
11 RP11-7F12 C 11q25(FHCRC)
chr11 131Mb AC113009.8, AC010786.4*u SHGC-248 B72022.1 T7,
B72021.1 SP6
11 RP11-15J5 R 11q25b(NCI)
chr11 131Mb AC012234.6 SHGC-4808 B75352.1 T7,
B75351.1 SP6
11 RP11-469N6 R 11q25d(NCI)
chr11 133Mb AP001999.4   AQ630410.1 T7,
AQ630407.1 SP6
11 RP11-651K21 11qter(UChicago)
chr11 131Mb AC073904.3,
total242C:144 R:67 S:53242240 24279141 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.