NCBI HMM accession
Source identifier
Product name

Name propagated to proteins best supported by this HMM ( Read more ).

Label

A brief and often easy to remember shorthand that assists HMM users in understanding search results at a glance.

Gene symbol
Family type

The family type indicates the HMM specificity and the diversity of protein hits. (Read more)

EC number(s)
GO term(s)

Gene Ontology (GO) terms: controlled vocabulary that define the function of genes with respect to three categories: molecular function (green), biological process (blue), and cellular component (red).

HMM length

HMM length corresponds to the number of amino acid positions in the HMM seed alignments.

Sequence cutoff

Minimum hmmsearch full-sequence score for the protein to be considered a hit to this HMM.

Domain cutoff

Minimum hmmsearch domain score for the protein to be considered a hit to this HMM.

Number of RefSeq protein hits

The number of RefSeq proteins with sequence and domain scores above the HMM’s sequence and domain cutoffs, respectively.

counting ...
HMM profile

A statistical profile showing the amino acid probability distribution for each position in a protein family.

HMM seed

A multiple sequence alignment of seed proteins for building the profile HMM.

Named by this evidence (...)
Other hits (...)

No RefSeq protein is named by this evidence.

Failed to load data from server. Please refresh the page to try again.

All matching RefSeq proteins are named by this evidence.

Failed to load data from server. Please refresh the page to try again.

No data found. Please try again.