Eukaryotic RefSeq Genome Annotation Status

NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:

Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.

Annotation runs in progress

An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.

Species RefSeq assembly(ies) Annotation Release Freeze Date Status
Dermochelys coriacea (leatherback sea turtle) rDerCor1.pri.v2 100 2020-08-06 Automated processing in progress
Zalophus californianus (California sea lion) mZalCal1.pri.v2 (GCF_009762305.2) 101 2020-07-29 In sequence databases

On the FTP
Canis lupus dingo (dingo) UNSW_AlpineDingo_1.0 (GCF_012295265.1) 101 2020-07-29 In sequence databases

On the FTP
Juglans regia (English walnut) Walnut 2.0 (GCF_001411555.2) 101 2020-07-27 In sequence databases

In Gene

On the FTP
Canis lupus familiaris (dog) canfam4

UMICH_Zoey_3.1

UNSW_CanFamBas_1.0

UU_Cfam_GSD_1.0

ASM864105v3
106 2020-07-20 Automated processing in progress
Ambystoma mexicanum (axolotl) ASM291563v2 100 2020-05-15 Automated processing in progress

Recently completed annotation runs

Genomes annotated in the past 6 weeks.

Species RefSeq assembly(ies) Annotation Release Freeze Date Release Date Links
Spodoptera frugiperda (fall armyworm) ZJU_Sfru_1.0 (GCF_011064685.1) 101 2020-07-23 2020-07-24 FTP B AR GDV
Morone saxatilis (striped sea-bass) NCSU_SB_2.0 (GCF_004916995.1) 100 2020-07-22 2020-07-27 FTP B AR GDV
Scophthalmus maximus (turbot) ASM1334776v1 (GCF_013347765.1) 100 2020-07-17 2020-07-26 FTP B AR GDV
Cygnus atratus (black swan) Cygnus_atratus_primary_v1.0 (GCF_013377495.1) 100 2020-07-16 2020-07-20 FTP B AR GDV
Electrophorus electricus (electric eel) fEleEle1.pri (GCF_013358815.1) 101 2020-07-10 2020-07-16 FTP B AR GDV
Stegodyphus dumicola (spiders) ASM1061486v1 (GCF_010614865.1) 100 2020-07-01 2020-07-07 FTP B AR GDV
Anguilla anguilla (European eel) fAngAng1.pri (GCF_013347855.1) 100 2020-07-01 2020-07-07 FTP B AR GDV
Oxyura jamaicensis (ruddy duck) BPBGC_Ojam_1.0 (GCF_011077185.1) 100 2020-06-29 2020-07-05 FTP B AR GDV
Hippoglossus stenolepis (Pacific halibut) IPHC_HiSten_1.0 (GCF_013339905.1) 100 2020-06-26 2020-06-29 FTP B AR GDV
Cricetulus griseus (Chinese hamster) CriGri_1.0 (GCF_000223135.1)

CriGri-PICRH-1.0 (GCF_003668045.3)
104 2020-06-25 2020-07-12 FTP B AR GDV
Callithrix jacchus (white-tufted-ear marmoset) Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 105 2020-06-04 2020-07-04 FTP B AR GDV

Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.

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Last updated: 2019-04-12T14:50:38Z