Eukaryotic RefSeq Genome Annotation Status

NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:

Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.

Annotation runs in progress

An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.

Species RefSeq assembly(ies) Annotation Release Freeze Date Status
Penaeus vannamei (Pacific white shrimp) ASM378908v1 100 2018-12-07 Automated processing in progress
Anas platyrhynchos (mallard) IASCAAS_PekingDuck_PBH1.5 103 2018-12-07 Automated processing in progress
Coffea eugenioides (eudicots) Ceug_1.0 (GCF_003713205.1) 100 2018-12-05 In sequence databases

On the FTP
Larimichthys crocea (large yellow croaker) L_crocea_2.0 (GCF_000972845.2) 102 2018-12-04 In sequence databases

On the FTP
Cicer arietinum (chickpea) ASM33114v1 (GCF_000331145.1) 102 2018-12-03 Automated processing in progress

Recently completed annotation runs

Genomes annotated in the past 6 weeks.

Species RefSeq assembly(ies) Annotation Release Freeze Date Release Date Links
Coffea arabica (coffee) Cara_1.0 (GCF_003713225.1) 100 2018-11-26 2018-12-04 FTP AR GDV
Pocillopora damicornis (stony corals) ASM370409v1 (GCF_003704095.1) 100 2018-11-26 2018-11-30 FTP B AR GDV
Tachysurus fulvidraco (yellow catfish) ASM372403v1 (GCF_003724035.1) 100 2018-11-19 2018-11-26 FTP B AR GDV
Lagenorhynchus obliquidens (Pacific white-sided dolphin) ASM367639v1 (GCF_003676395.1) 100 2018-11-13 2018-11-16 FTP B AR GDV
Acinonyx jubatus (cheetah) Aci_jub_2 (GCF_003709585.1) 101 2018-11-07 2018-11-13 FTP B AR
Electrophorus electricus (electric eel) Ee_SOAP_WITH_SSPACE (GCF_003665695.1) 100 2018-11-06 2018-11-08 FTP B AR GDV
Drosophila persimilis (flies) DperRS2 (GCF_003286085.1) 101 2018-11-05 2018-11-07 FTP B AR GDV
Drosophila erecta (flies) DereRS2 (GCF_003286155.1) 101 2018-11-01 2018-11-06 FTP B AR GDV
Ooceraea biroi (clonal raider ant) Obir_v5.4 (GCF_003672135.1) 100 2018-10-31 2018-11-07 FTP B AR GDV
Rhopalosiphum maidis (corn leaf aphid) ASM367621v1 (GCF_003676215.1) 100 2018-10-31 2018-11-01 FTP B AR GDV
Pangasianodon hypophthalmus (striped catfish) VN_pangasius (GCF_003671635.1) 100 2018-10-30 2018-11-01 B AR GDV

Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.

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Last updated: 2017-11-13T22:01:16Z