Cynara cardunculus var. scolymus
Representative genome: Cynara cardunculus var. scolymus (assembly CcrdV1)
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BLAST against Cynara cardunculus var. scolymus genome, transcript, protein

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ID: 11286
Organism ImageCynara cardunculus var. scolymus

Cynara cardunculus var. scolymus Organism overview

Lineage: Eukaryota[4304]; Viridiplantae[476]; Streptophyta[413]; Embryophyta[410]; Tracheophyta[406]; Spermatophyta[403]; Magnoliopsida[395]; eudicotyledons[307]; Gunneridae[307]; Pentapetalae[307]; asterids[89]; campanulids[13]; Asterales[11]; Asteraceae[9]; Carduoideae[3]; Cardueae[3]; Carduinae[2]; Cynara[1]; Cynara cardunculus[1]; Cynara cardunculus subsp. cardunculus[1]; Cynara cardunculus var. scolymus[1]
Globe artichoke is an important European crop with much in situ diversity through out the range. Globe artichoke exhibits considerable inbreeding depression with repeated selfing, thus commercial production is based on perennial cultivation of vegatatively propagated clones. The effort to develop seed-propagated cultivars is ongoing. The results More...

Summary

Submitter: Compositae Genome Project
Assembly level: Chromosome
Assembly: GCA_001531365.1 CcrdV1 scaffolds: 13,588 contigs: 73,428 N50: 19,399 L50: 9,583
BioProjects: PRJNA453787, PRJNA238069
Whole Genome Shotgun (WGS): INSDC: LEKV00000000.1
Statistics: total length (Mb): 725.198
 protein count: 38406
 GC%: 36.7454

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
ChrLG 1NC_037528.1CM009732.149.7535.73,865-543432,95083
ChrLG 2NC_037529.1CM009733.170.4437.13,400-603312,68890
ChrLG 3NC_037530.1CM009734.140.336.02,653-452662,08978
ChrLG 4NC_037531.1CM009735.120.1635.71,469-291281,11428
ChrLG 5NC_037532.1CM009736.137.235.72,234-471961,84156
ChrLG 6NC_037533.1CM009737.120.6336.11,271-199097830
ChrLG 7NC_037534.1CM009738.115.5735.21,287-2110194427
ChrLG 8NC_037535.1CM009739.125.9536.01,640-411401,35952
ChrLG 9NC_037536.1CM009740.118.3435.71,456-281221,09940
ChrLG 10NC_037537.1CM009741.129.1336.02,169-241751,59467
ChrLG 11NC_037538.1CM009742.122.0234.72,199-231001,55736
ChrLG 12NC_037539.1CM009743.139.6936.51,997-261611,51253
ChrLG 13NC_037540.1CM009744.141.5536.02,5681422232,02067
ChrLG 14NC_037541.1CM009745.114.4935.1880-2311472216
ChrLG 15NC_037542.1CM009746.121.2834.72,145-261571,59136
ChrLG 16NC_037543.1CM009747.121.9335.91,399-151261,07751
ChrLG 17NC_037544.1CM009748.137.7437.21,7642331871,44252
Un-.-199.0238.64,0103234833,373121

Chromosomes

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