Cucurbita pepo
Representative genome: Cucurbita pepo subsp. pepo (assembly ASM280686v2)
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BLAST against Cucurbita pepo genome, transcript, protein

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ID: 12199
Cucurbita pepo

Cucurbita pepo Organism overview

Lineage: Eukaryota[4304]; Viridiplantae[476]; Streptophyta[413]; Embryophyta[410]; Tracheophyta[406]; Spermatophyta[403]; Magnoliopsida[395]; eudicotyledons[307]; Gunneridae[307]; Pentapetalae[307]; rosids[197]; fabids[111]; Cucurbitales[11]; Cucurbitaceae[9]; Cucurbiteae[4]; Cucurbita[4]; Cucurbita pepo[1]
Cucurbita pepo was domesticated in the New World and has been a is a cultivated plant for thousands of years. It includes varieties of winter squash, pumpkin and summer squash. It is used as a food source and to treat some medical medical conditions.

Summary

Submitter: Comav-UPV
Assembly level: Chromosome
Assembly: GCA_002806865.2 ASM280686v2 scaffolds: 25,263 contigs: 31,835 N50: 109,364 L50: 617
BioProjects: PRJNA421955, PRJNA386743
Whole Genome Shotgun (WGS): INSDC: NHTM00000000.1
Statistics: total length (Mb): 261.355
 protein count: 43466
 GC%: 37.2561

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
ChrLG01NC_036638.1CM008918.121.3236.44,163972884903,35782
ChrLG02NC_036639.1CM008919.114.3836.92,762-1333432,13444
ChrLG03NC_036640.1CM008920.113.7736.32,888-1553142,26643
ChrLG04NC_036641.1CM008921.112.7137.02,534-1403182,01828
ChrLG05NC_036642.1CM008922.110.8736.42,476-1292491,93637
ChrLG06NC_036643.1CM008923.110.6837.21,649-1612531,39028
ChrLG07NC_036644.1CM008924.110.1537.21,76611432111,43027
ChrLG08NC_036645.1CM008925.110.0636.42,147-642391,63026
ChrLG09NC_036646.1CM008926.19.9237.01,792-2162011,55645
ChrLG10NC_036647.1CM008927.19.8436.81,943-842151,48827
ChrLG11NC_036648.1CM008928.19.8336.61,927-872201,47928
ChrLG12NC_036649.1CM008929.19.8236.31,911-1121981,47936
ChrLG13NC_036650.1CM008930.19.3536.51,990-1102121,46826
ChrLG14NC_036651.1CM008931.18.9636.81,68441062071,33335
ChrLG15NC_036652.1CM008932.18.8236.71,437-1391771,22427
ChrLG16NC_036653.1CM008933.18.6937.31,477-851811,22143
ChrLG17NC_036654.1CM008934.18.6836.41,752-1032101,36417
ChrLG18NC_036655.1CM008935.18.3337.31,465-1211931,22628
ChrLG19NC_036656.1CM008936.18.2536.71,761-901631,40434
ChrLG20NC_036657.1CM008937.18.1236.81,428-441931,12123
MTNC_014050.1-0.9842.838313-551
Un-.-47.8339.52,476182602842,51762

Chromosomes

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