Crassostrea virginica (eastern oyster)
Representative genome: Crassostrea virginica (assembly C_virginica-3.0)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Crassostrea virginica genome, transcript, protein

Try NCBI Datasets - a new way to download genome sequence and annotation we're testing in NCBI Labs

Display Settings:

Format

Send to:

Choose Destination
ID: 398
Organism ImageCrassostrea virginica (eastern oyster)

The eastern oyster is a mollusk of commercial importance

Lineage: Eukaryota[8059]; Metazoa[3802]; Spiralia[164]; Lophotrochozoa[146]; Mollusca[76]; Bivalvia[33]; Autobranchia[33]; Pteriomorphia[19]; Ostreida[6]; Ostreoidea[6]; Ostreidae[6]; Crassostrea[3]; Crassostrea virginica[1]
The Crassostrea virginica, or eastern oyster, is a filter-feeding mollusk. It is a marine animal and consumes phytoplankton. This species is abundant on the east coast of America, and is of commercial value.

Summary

Submitter: McDonnell Genome Institute - Washington University School of Medicine
Assembly level: Chromosome
Assembly: GCA_002022765.4 C_virginica-3.0 scaffolds: 11 contigs: 669 N50: 1,971,208 L50: 108
BioProjects: PRJNA379157
Whole Genome Shotgun (WGS): INSDC: MWPT00000000.3
Statistics: total length (Mb): 684.741
 protein count: 60201
 GC%: 34.8191
NCBI Annotation Release:  100

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein tRNA Gene Pseudogene
Chr1NC_035780.1CM008241.165.6735.15,997853,93270
Chr2NC_035781.1CM008242.161.7535.26,461294,13784
Chr3NC_035782.1CM008243.177.0635.07,835474,712100
Chr4NC_035783.1CM008244.159.6935.16,0291463,89662
Chr5NC_035784.1CM008245.198.735.010,0721676,23985
Chr6NC_035785.1CM008246.151.2634.63,855222,63035
Chr7NC_035786.1CM008247.157.8334.54,508333,01537
Chr8NC_035787.1CM008248.175.9434.66,597194,44591
Chr9NC_035788.1CM008249.1104.1734.47,057134,96085
Chr10NC_035789.1CM008250.132.6534.81,79031,52718

Chromosomes

Click on chromosome name to open Genome Data Viewer

Supplemental Content

NCBI Resources

Tools

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center