| Sequence data: | genome assemblies: 34; sequence reads: 45 | (See Genome Assembly and Annotation report) | | | Statistics: | median total length (Mb): 1044.12 | | median protein count: 68344 | | median GC%: 42 | | NCBI Annotation Release: | 106 |
- Evolutionary analysis of a complete chicken genome. Huang Z, et al. Proc Natl Acad Sci U S A 2023 Feb 21
- De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions. Li M, et al. Mol Biol Evol 2022 Apr 10
- Towards complete and error-free genome assemblies of all vertebrate species. Rhie A, et al. Nature 2021 Apr
- Avian W and mammalian Y chromosomes convergently retained dosage-sensitive regulators. Bellott DW, et al. Nat Genet 2017 Mar
- A second TCRδ locus in Galliformes uses antibody-like V domains: insight into the evolution of TCRδ and TCRμ genes in tetrapods. Parra ZE, et al. J Immunol 2012 Apr 15
- Convergent evolution of chicken Z and human X chromosomes by expansion and gene acquisition. Bellott DW, et al. Nature 2010 Jul 29
- Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol 2005
- The chicken leukocyte receptor complex: a highly diverse multigene family encoding at least six structurally distinct receptor types. Viertlboeck BC, et al. J Immunol 2005 Jul 1
- Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. International Chicken Genome Sequencing Consortium. Nature 2004 Dec 9
- A 260-kDa filamin/ABP-related protein in chicken gizzard smooth muscle cells is a new component of the dense plaques and dense bodies of smooth muscle. Tachikawa M, et al. J Biochem 1997 Aug
- Characterization of cDNAs encoding the chick retinoic acid receptor gamma 2 and preferential distribution of retinoic acid receptor gamma transcripts during chick skin development. Michaille JJ, et al. Dev Dyn 1994 Dec
- Sequence and gene organization of the chicken mitochondrial genome. A novel gene order in higher vertebrates. Desjardins P, et al. J Mol Biol 1990 Apr 20
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Reference genome:  
Gallus gallus bGalGal1.mat.broiler.GRCg7b|
Loc
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Type
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Name
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RefSeq
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INSDC
|
Size (Mb)
|
GC%
|
Protein
|
rRNA
|
tRNA
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Other RNA
|
Gene
|
Pseudogene
|
|---|
| Chr | 1 | NC_052532.1 | CM028482.1 | 196.45 | 40.4 | 9,068 | - | 41 | 2,393 | 3,542 | 22 | | | Chr | 2 | NC_052533.1 | CM028483.1 | 149.54 | 40.1 | 6,315 | 1 | 58 | 1,740 | 2,419 | 4 | | | Chr | 3 | NC_052534.1 | CM028484.1 | 110.64 | 40.2 | 5,194 | - | 19 | 1,512 | 1,965 | 6 | | | Chr | 4 | NC_052535.1 | CM028485.1 | 90.86 | 40.3 | 5,032 | - | 3 | 1,250 | 1,751 | 5 | | | Chr | 5 | NC_052536.1 | CM028486.1 | 59.51 | 41.3 | 4,394 | - | 11 | 882 | 1,418 | 1 | | | Chr | 6 | NC_052537.1 | CM028487.1 | 36.22 | 42.2 | 2,538 | 1 | 3 | 730 | 843 | 5 | | | Chr | 7 | NC_052538.1 | CM028488.1 | 36.38 | 41.6 | 2,860 | - | 21 | 631 | 778 | 1 | | | Chr | 8 | NC_052539.1 | CM028489.1 | 29.58 | 42.2 | 2,586 | - | 2 | 441 | 766 | 3 | | | Chr | 9 | NC_052540.1 | CM028490.1 | 23.73 | 43.2 | 2,010 | 38 | 2 | 449 | 671 | 5 | | | Chr | 10 | NC_052541.1 | CM028491.1 | 20.45 | 43.6 | 1,859 | - | 16 | 488 | 634 | 2 | | | Chr | 11 | NC_052542.1 | CM028492.1 | 19.64 | 42.6 | 1,358 | - | 11 | 398 | 543 | - | | | Chr | 12 | NC_052543.1 | CM028493.1 | 20.12 | 43.8 | 1,767 | - | 1 | 384 | 525 | 1 | | | Chr | 13 | NC_052544.1 | CM028494.1 | 17.91 | 44.9 | 1,275 | - | 1 | 333 | 505 | 4 | | | Chr | 14 | NC_052545.1 | CM028495.1 | 15.33 | 45.7 | 1,731 | - | 4 | 321 | 578 | 1 | | | Chr | 15 | NC_052546.1 | CM028496.1 | 12.7 | 45.6 | 1,514 | - | 6 | 287 | 486 | - | | | Chr | 16 | NC_052547.1 | CM028497.1 | 2.71 | 57.6 | 533 | 52 | 24 | 125 | 309 | 26 | | | Chr | 17 | NC_052548.1 | CM028498.1 | 11.09 | 48.5 | 1,323 | - | 2 | 362 | 451 | 1 | | | Chr | 18 | NC_052549.1 | CM028499.1 | 11.62 | 47.6 | 1,326 | - | 13 | 333 | 449 | - | | | Chr | 19 | NC_052550.1 | CM028500.1 | 10.46 | 47.7 | 1,489 | - | 2 | 339 | 520 | 2 | | | Chr | 20 | NC_052551.1 | CM028501.1 | 14.27 | 46.1 | 1,283 | - | 3 | 333 | 479 | - | | | Chr | 21 | NC_052552.1 | CM028502.1 | 6.97 | 47.8 | 1,012 | - | - | 134 | 322 | - | | | Chr | 22 | NC_052553.1 | CM028503.1 | 4.69 | 48.6 | 565 | - | 1 | 154 | 230 | - | | | Chr | 23 | NC_052554.1 | CM028504.1 | 6.25 | 51.2 | 907 | - | - | 150 | 351 | - | | | Chr | 24 | NC_052555.1 | CM028505.1 | 6.48 | 49.5 | 697 | - | - | 125 | 244 | 1 | | | Chr | 25 | NC_052556.1 | CM028506.1 | 3.07 | 56.8 | 888 | - | 2 | 100 | 386 | - | | | Chr | 26 | NC_052557.1 | CM028507.1 | 5.35 | 52.3 | 1,013 | - | 3 | 167 | 344 | 1 | | | Chr | 27 | NC_052558.1 | CM028508.1 | 5.23 | 52.7 | 1,004 | - | 16 | 153 | 410 | 1 | | | Chr | 28 | NC_052559.1 | CM028509.1 | 5.44 | 53.1 | 1,032 | - | 4 | 156 | 407 | 1 | | | Chr | 29 | NC_052560.1 | CM028510.1 | 0.73 | 53.0 | 63 | - | - | 14 | 37 | 4 | | | Chr | 30 | NC_052561.1 | CM028511.1 | 0.76 | 59.3 | 163 | - | - | 26 | 77 | - | | | Chr | 31 | NC_052562.1 | CM028512.1 | 2.46 | 52.1 | 562 | - | - | 77 | 268 | 13 | | | Chr | 32 | NC_052563.1 | CM028513.1 | 0.13 | 55.2 | 22 | - | - | 11 | 15 | - | | | Chr | 33 | NC_052564.1 | CM028514.1 | 3.84 | 49.4 | 224 | - | - | 10 | 211 | 14 | | | Chr | 34 | NC_052565.1 | CM028515.1 | 3.47 | 57.4 | 587 | - | 1 | 88 | 308 | 3 | | | Chr | 35 | NC_052566.1 | CM028516.1 | 0.55 | 56.6 | 81 | - | - | 14 | 49 | - | | | Chr | 36 | NC_052567.1 | CM028517.1 | 0.36 | 58.3 | 39 | - | - | 3 | 18 | - | | | Chr | 37 | NC_052568.1 | CM028518.1 | 0.16 | 55.3 | 16 | - | - | 14 | 22 | - | | | Chr | 38 | NC_052569.1 | CM028519.1 | 0.67 | 62.2 | 115 | - | - | 6 | 70 | - | | | Chr | 39 | NC_052570.1 | CM028520.1 | 0.18 | 63.3 | 42 | - | - | 1 | 20 | - | | | Chr | W | NC_052571.1 | CM028521.1 | 9.11 | 46.6 | 189 | - | - | 98 | 127 | 4 | | | Chr | Z | NC_052572.1 | CM028522.1 | 86.04 | 41.4 | 3,148 | - | 2 | 1,059 | 1,492 | 27 | | | | MT | NC_053523.1 | CM028585.1 | 0.02 | 46.0 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 12.19 | 52.0 | 847 | - | 9 | 262 | 561 | 40 | |
Click on chromosome name to open Genome Data Viewer |