Genome

Mycolicibacterium smegmatis Causes opportunistic infections Lineage: Bacteria[36038]; Actinomycetota[4664]; Actinomycetes[4256]; Mycobacteriales[706]; Mycobacteriaceae[249]; Mycolicibacterium[99]; Mycolicibacterium smegmatis[1]

Mycobacterium. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high More...genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall.Mycobacterium smegmatis. This bacterium was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis. Less...

Summary Sequence data:  genome assemblies: 67; sequence reads: 10  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 6.84495  median protein count: 6453  median GC%: 67.4 Publications (limited to 20 most recent records) FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25 Complete Genome Sequences of a Mycobacterium smegmatis Laboratory Strain (MC2 155) and Isoniazid-Resistant (4XR1/R2) Mutant Strains. Mohan A, et al. Genome Announc 2015 Feb 5 Draft Genome Sequence of mc251, a Highly Hydrogen Peroxide-Resistant Mycobacterium smegmatis Mutant Strain. Li X, et al. Genome Announc 2014 Feb 20 Draft Genome Sequence of MKD8, a Conjugal Recipient Mycobacterium smegmatis Strain. Gray TA, et al. Genome Announc 2013 Apr 25 Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol. Gallien S, et al. Genome Res 2009 Jan Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors? Deshayes C, et al. Genome Biol 2007 ICDS database: interrupted CoDing sequences in prokaryotic genomes. Perrodou E, et al. Nucleic Acids Res 2006 Jan 1 More...  Representative (genome information for reference and representative genomes) Reference genome:   Mycolicibacterium smegmatis ASM1334914v1 Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NZ_CP054795.1 CP054795.1 6.99 67.4 6,530 9 47 3 6,713 124 Plsm unnamed NZ_CP054796.1 CP054796.1 0 37.0 1 - - - 1 - Dendrogram (based on genomic BLAST)