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    Rab40 RAS oncogene family member Rab40 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 658373, updated on 15-May-2024

    Summary

    Gene symbol
    Rab40
    Gene description
    RAS oncogene family member Rab40
    Locus tag
    TcasGA2_TC030618
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
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    Genomic context

    See Rab40 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 6 NC_087399.1 (1122241..1124464)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG8 NC_007423.3 (13575291..13577511, complement)

    Chromosome 6 - NC_087399.1Genomic Context describing neighboring genes Neighboring gene Chitin and LDLR binding deacetylase 3 Neighboring gene SR family splicing factor SC35 Neighboring gene glucose-induced degradation protein 4 homolog Neighboring gene U6 snRNA-associated Sm-like protein LSm7

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ras-related protein Rab-40B
    Names
    AUGUSTUS-3.0.2_30618
    GLEAN_05410-OG15740
    Ras-related protein Rab-3-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087399.1 Reference icTriCast1.1 Primary Assembly

      Range
      1122241..1124464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964767.5XP_969860.2  ras-related protein Rab-40B

      UniProtKB/TrEMBL
      D6WYZ4
      Conserved Domains (3) summary
      smart00175
      Location:17177
      RAB; Rab subfamily of small GTPases
      cd03742
      Location:187229
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...
      cl21455
      Location:11183
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases