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    LOC658875 male-specific lethal 3 homolog [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 658875, updated on 13-Feb-2021

    Summary

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    Gene symbol
    LOC658875
    Gene description
    male-specific lethal 3 homolog
    Locus tag
    TcasGA2_TC015252
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC658875 in Genome Data Viewer
    Location:
    chromosome: LG8
    Exon count:
    8
    Annotation release Status Assembly LG Location
    103 current Tcas5.2 (GCF_000002335.3) LG8 NC_007423.3 (9487990..9490343)
    102 previous assembly Tcas_3.0 (GCF_000002335.2) LG6 NC_007421.2 (1887399..1889714, complement)

    Linkage Group LG8 - NC_007423.3Genomic Context describing neighboring genes Neighboring gene probable low-specificity L-threonine aldolase 2 Neighboring gene exosome complex exonuclease RRP6-like Neighboring gene inverted formin-2-like Neighboring gene uncharacterized LOC100141552 Neighboring gene uncharacterized LOC107398481 Neighboring gene uncharacterized LOC107398476

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium., et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    male-specific lethal 3 homolog
    Names
    AUGUSTUS-3.0.2_30898
    GLEAN_15252

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tribolium castaneum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tcas5.2 Primary Assembly

    Genomic

    1. NC_007423.3 Reference Tcas5.2 Primary Assembly

      Range
      9487990..9490343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_965226.4 → XP_970319.1  male-specific lethal 3 homolog

      See identical proteins and their annotated locations for XP_970319.1

      Conserved Domains (2) summary
      pfam05712
      Location:150 → 421
      MRG; MRG
      pfam11717
      Location:11 → 74
      Tudor-knot; RNA binding activity-knot of a chromodomain
    Nucleotide Protein Strain
    Heading Accession and Version

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