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    LOC656266 PAX3- and PAX7-binding protein 1 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 656266, updated on 19-Apr-2024

    Summary

    Gene symbol
    LOC656266
    Gene description
    PAX3- and PAX7-binding protein 1
    Locus tag
    TcasGA2_TC014258
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (7515383..7517716, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (8079564..8081923)

    Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-Galactosyltransferase II Neighboring gene Transcription factor TFIIFbeta Neighboring gene cell division cycle-associated protein 3 Neighboring gene COMM domain-containing protein 2 Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene taiman

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal complex disassembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U2-type post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    PAX3- and PAX7-binding protein 1
    Names
    GLEAN_14258

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

      Range
      7515383..7517716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_962807.4XP_967900.1  PAX3- and PAX7-binding protein 1

      See identical proteins and their annotated locations for XP_967900.1

      UniProtKB/TrEMBL
      D6WKW5
      Conserved Domains (2) summary
      pfam07842
      Location:485691
      GCFC; GC-rich sequence DNA-binding factor-like protein
      pfam15458
      Location:157330
      NTR2; Nineteen complex-related protein 2