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    Idgf2 imaginal disc growth factor 2 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 655122, updated on 2-Apr-2025
    Gene symbol
    Idgf2
    Gene description
    imaginal disc growth factor 2
    Locus tag
    TcasGA2_TC013918
    See related
    EnsemblRapid:GeneID_655122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Also known as
    TcIDGF2
    Orthologs
    all
    NEW
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    See Idgf2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (13218911..13224412)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (2190916..2196417, complement)

    Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC655053 Neighboring gene imaginal disc growth factor 4 Neighboring gene exosome component Rrp6 Neighboring gene transmembrane protein 98 Neighboring gene ATP-binding cassette sub-family F member 2 Neighboring gene Kelch-like protein diablo

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Domain organization and phylogenetic analysis of the chitinase-like family of proteins in three species of insects. Zhu Q, et al. Insect Biochem Mol Biol, 2008 Apr. PMID 18342250
    2. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    3. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chitin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    imaginal disc growth factor 2
    Names
    AUGUSTUS-3.0.2_13918
    Chitinase-like protein Idgf4
    GLEAN_13918

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044627.1 → NP_001038092.1  imaginal disc growth factor 2 precursor

      See identical proteins and their annotated locations for NP_001038092.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ659253
      UniProtKB/TrEMBL
      Q0Z936
      Related
      NP_001038092.1, NM_001044627.1
      Conserved Domains (2) summary
      smart00636
      Location:25 → 418
      Glyco_18; Glyco_18 domain
      cl10447
      Location:25 → 439
      GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

      Range
      13218911..13224412
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials