U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC657829 T-lymphocyte activation antigen CD86 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657829, updated on 2-Apr-2025

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC657829
    Gene description
    T-lymphocyte activation antigen CD86
    Locus tag
    TcasGA2_TC012784
    See related
    EnsemblRapid:LOC657829
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC657829 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (25289317..25395224)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (14744355..14849389)

    Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene equilibrative nucleoside transporter 3-like Neighboring gene position-specific antigen beta subunit myospheroid Neighboring gene Ret oncogene Neighboring gene CD63 antigen Neighboring gene Ecdysone-induced protein 63F 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in synapse organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    T-lymphocyte activation antigen CD86; kin of IRRE-like protein 3; lachesin
    Names
    AUGUSTUS-3.0.2_34457
    GLEAN_12784

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

      Range
      25289317..25395224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964264.5 → XP_969357.3  kin of IRRE-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A139WBT9
      Related
      XP_969357.3, XM_964264.5
      Conserved Domains (3) summary
      smart00409
      Location:48 → 145
      IG; Immunoglobulin
      smart00410
      Location:163 → 243
      IG_like; Immunoglobulin like
      cd00096
      Location:166 → 170
      Ig; Ig strand B [structural motif]

    2. XM_008200176.3 → XP_008198398.1  lachesin isoform X2

      Related
      XP_008198398.1, XM_008200176.3
      Conserved Domains (3) summary
      smart00409
      Location:159 → 239
      IG; Immunoglobulin
      smart00410
      Location:48 → 141
      IG_like; Immunoglobulin like
      cd00096
      Location:51 → 53
      Ig; Ig strand A' [structural motif]

    3. XM_064354743.1 → XP_064210813.1  T-lymphocyte activation antigen CD86 isoform X3

      Related
      XP_064210813.1, XM_064354743.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials