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    LOC663261 probable 28S rRNA (cytosine-C(5))-methyltransferase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 663261, updated on 13-Feb-2021

    Summary

    Gene symbol
    LOC663261
    Gene description
    probable 28S rRNA (cytosine-C(5))-methyltransferase
    Locus tag
    TcasGA2_TC011896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

    See LOC663261 in Genome Data Viewer
    Location:
    chromosome: LG9
    Exon count:
    2
    Annotation release Status Assembly LG Location
    103 current Tcas5.2 (GCF_000002335.3) LG9 NC_007424.3 (12139214..12141584, complement)
    102 previous assembly Tcas_3.0 (GCF_000002335.2) LG9 NC_007424.2 (16554246..16556593, complement)

    Linkage Group LG9 - NC_007424.3Genomic Context describing neighboring genes Neighboring gene disintegrin and metalloproteinase domain-containing protein 11 Neighboring gene uncharacterized LOC107398644 Neighboring gene dynein assembly factor 3, axonemal homolog Neighboring gene probable receptor-like protein kinase At5g18500 Neighboring gene uncharacterized LOC663320

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    probable 28S rRNA (cytosine-C(5))-methyltransferase
    Names
    AUGUSTUS-3.0.2_11896
    GLEAN_11896
    Putative ribosomal RNA methyltransferase NOP2-like Protein
    putative ribosomal RNA methyltransferase NOP2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tribolium castaneum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tcas5.2 Primary Assembly

    Genomic

    1. NC_007424.3 Reference Tcas5.2 Primary Assembly

      Range
      12139214..12141584 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_969317.3XP_974410.1  probable 28S rRNA (cytosine-C(5))-methyltransferase

      See identical proteins and their annotated locations for XP_974410.1

      UniProtKB/TrEMBL
      D6WZ57
      Conserved Domains (3) summary
      TIGR00446
      Location:268542
      nop2p; NOL1/NOP2/sun family putative RNA methylase
      pfam01189
      Location:333541
      Nol1_Nop2_Fmu; 16S rRNA methyltransferase RsmF
      pfam17125
      Location:255329
      Methyltr_RsmF_N; N-terminal domain of 16S rRNA methyltransferase RsmF