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    LOC663261 probable 28S rRNA (cytosine-C(5))-methyltransferase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 663261, updated on 2-Apr-2025
    Gene symbol
    LOC663261
    Gene description
    probable 28S rRNA (cytosine-C(5))-methyltransferase
    Locus tag
    TcasGA2_TC011896
    See related
    EnsemblRapid:LOC663261
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table
    See LOC663261 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (22665705..22668108, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (12139214..12141584, complement)

    Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene disintegrin and metalloproteinase domain-containing protein mind-meld Neighboring gene uncharacterized LOC107398644 Neighboring gene serine/threonine-protein kinase pelle Neighboring gene Dynein axonemal assembly factor 3 Neighboring gene DNA fragmentation factor-related protein 2

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables rRNA (cytosine-C5-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in rRNA base methylation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Preferred Names
    probable 28S rRNA (cytosine-C(5))-methyltransferase
    Names
    AUGUSTUS-3.0.2_11896
    GLEAN_11896
    Putative ribosomal RNA methyltransferase NOP2-like Protein
    putative ribosomal RNA methyltransferase NOP2

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

      Range
      22665705..22668108 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_969317.4XP_974410.1  probable 28S rRNA (cytosine-C(5))-methyltransferase

      See identical proteins and their annotated locations for XP_974410.1

      UniProtKB/TrEMBL
      D6WZ57
      Related
      XP_974410.1, XM_969317.4
      Conserved Domains (3) summary
      TIGR00446
      Location:268542
      nop2p; NOL1/NOP2/sun family putative RNA methylase
      pfam01189
      Location:333541
      Nol1_Nop2_Fmu; 16S rRNA methyltransferase RsmF
      pfam17125
      Location:255329
      Methyltr_RsmF_N; N-terminal domain of 16S rRNA methyltransferase RsmF