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    Idh Isocitrate dehydrogenase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657289, updated on 12-Apr-2024

    Summary

    Gene symbol
    Idh
    Gene description
    Isocitrate dehydrogenase
    Locus tag
    TcasGA2_TC011647
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

    See Idh in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (26554568..26556391)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (15990963..15992758)

    Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene Osiris 18 Neighboring gene Osiris 17 Neighboring gene mpv17-like protein Neighboring gene glutamate receptor ionotropic, kainate 3 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables isocitrate dehydrogenase (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in NADP metabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in isocitrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    isocitrate dehydrogenase [NADP] cytoplasmic
    Names
    AUGUSTUS-3.0.2_11647
    GLEAN_11647
    Isocitrate dehydrogenase [NADP] cytoplasmic-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

      Range
      26554568..26556391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_963757.5XP_968850.1  isocitrate dehydrogenase [NADP] cytoplasmic

      See identical proteins and their annotated locations for XP_968850.1

      UniProtKB/TrEMBL
      D6X0W4
      Conserved Domains (1) summary
      PTZ00435
      Location:1407
      PTZ00435; isocitrate dehydrogenase; Provisional
    2. XM_015983691.2XP_015839177.1  isocitrate dehydrogenase [NADP] cytoplasmic

      UniProtKB/TrEMBL
      D6X0W4
      Conserved Domains (1) summary
      PTZ00435
      Location:1407
      PTZ00435; isocitrate dehydrogenase; Provisional