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    LOC658138 phytanoyl-CoA dioxygenase, peroxisomal [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 658138, updated on 2-Apr-2025
    Gene symbol
    LOC658138
    Gene description
    phytanoyl-CoA dioxygenase, peroxisomal
    Locus tag
    TcasGA2_TC009711
    See related
    EnsemblRapid:LOC658138
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    all
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    See LOC658138 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (19984389..19986629, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (4734622..4736827)

    Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene EGF like, fibronectin type III and laminin G domains protein pikachurin Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene protein phosphatase 1 regulatory subunit 42 Neighboring gene vacuolar fusion protein MON1 homolog Neighboring gene pre-mRNA processing factor 38 Neighboring gene Cyclin T

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phytanoyl-CoA dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid alpha-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    phytanoyl-CoA dioxygenase, peroxisomal
    Names
    AUGUSTUS-3.0.2_09711
    GLEAN_09711
    Phytanoyl-CoA dioxygenase, peroxisomal-like Protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

      Range
      19984389..19986629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964548.4 → XP_969641.1  phytanoyl-CoA dioxygenase, peroxisomal

      UniProtKB/TrEMBL
      D6WU68
      Related
      XP_969641.1, XM_964548.4
      Conserved Domains (1) summary
      pfam05721
      Location:21 → 233
      PhyH; Phytanoyl-CoA dioxygenase (PhyH)
    Nucleotide Protein Strain
    Heading Accession and Version

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