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    LOC663552 protein Wnt-5b [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 663552, updated on 2-Apr-2025
    Gene symbol
    LOC663552
    Gene description
    protein Wnt-5b
    Locus tag
    TcasGA2_TC009318
    See related
    BEETLEBASE:TC009318; EnsemblRapid:LOC663552
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Also known as
    Wnt5
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table
    See LOC663552 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (24548240..24563625, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (332448..347756)

    Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein spenito Neighboring gene GDI interacting protein 3 Neighboring gene F-box and leucine rich repeat protein partner of paired Neighboring gene hypothetical protein

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    protein Wnt-5b; similar to wingless-type MMTV integration site family, member 5B precursor
    Names
    AUGUSTUS-3.0.2_09318
    GLEAN_09318
    Protein Wnt-5-like Protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

      Range
      24548240..24563625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_969591.4 → XP_974684.1  protein Wnt-5b

      See identical proteins and their annotated locations for XP_974684.1

      UniProtKB/TrEMBL
      D6WRU0
      Related
      XP_974684.1, XM_969591.4
      Conserved Domains (1) summary
      pfam00110
      Location:68 → 373
      wnt; wnt family
    Nucleotide Protein Strain
    Heading Accession and Version

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