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    LOC657814 peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657814, updated on 12-Apr-2024

    Summary

    Gene symbol
    LOC657814
    Gene description
    peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2
    Locus tag
    TcasGA2_TC009284
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

    See LOC657814 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (22959604..22963516)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (1916655..1920567, complement)

    Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene cilia- and flagella-associated protein 53 Neighboring gene zinc transporter ZIP3 Neighboring gene uncharacterized LOC657896 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene growth arrest-specific protein 1 Neighboring gene prostaglandin reductase 1 Neighboring gene Arginine methyltransferase 8

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in peptide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2
    Names
    AUGUSTUS-3.0.2_09284
    GLEAN_09284
    Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

      Range
      22959604..22963516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964249.3XP_969342.2  peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2 isoform X1

      See identical proteins and their annotated locations for XP_969342.2

      UniProtKB/TrEMBL
      D6WS07
      Conserved Domains (1) summary
      cd14958
      Location:67369
      NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    2. XM_008197064.3XP_008195286.1  peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2 isoform X2

      Conserved Domains (1) summary
      cd14958
      Location:50352
      NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)