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    Rpt3 26S proteasome regulatory subunit Rpt3 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 656344, updated on 2-Apr-2025
    Gene symbol
    Rpt3
    Gene description
    26S proteasome regulatory subunit Rpt3
    Locus tag
    TcasGA2_TC007999
    See related
    EnsemblRapid:GeneID_656344
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
    NEW
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    See Rpt3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (3819137..3822074)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (3702478..3704012)

    Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene proton channel OtopLc Neighboring gene proton channel OtopLc Neighboring gene bobby sox Neighboring gene yippee zinc finger protein Neighboring gene Aminoadipate-semialdehyde dehydrogenase

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    26S proteasome regulatory subunit 6B
    Names
    26S protease regulatory subunit 4-like Protein
    26S protease regulatory subunit 6B
    AUGUSTUS-3.0.2_07999
    GLEAN_07999
    Regulatory particle triple-A ATPase 3

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

      Range
      3819137..3822074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064359013.1 → XP_064215083.1  26S proteasome regulatory subunit 6B isoform X2

      Related
      XP_064215083.1, XM_064359013.1

    2. XM_962883.5 → XP_967976.1  26S proteasome regulatory subunit 6B isoform X1

      See identical proteins and their annotated locations for XP_967976.1

      UniProtKB/TrEMBL
      D2A3L0
      Related
      XP_967976.1, XM_962883.5
      Conserved Domains (1) summary
      PTZ00454
      Location:17 → 409
      PTZ00454; 26S protease regulatory subunit 6B-like protein; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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