U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC663599 tetratricopeptide repeat protein 5 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 663599, updated on 13-Feb-2021

    Summary

    Gene symbol
    LOC663599
    Gene description
    tetratricopeptide repeat protein 5
    Locus tag
    TcasGA2_TC007407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC663599 in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    8
    Annotation release Status Assembly LG Location
    103 current Tcas5.2 (GCF_000002335.3) LG4 NC_007419.2 (4959577..4961808, complement)
    102 previous assembly Tcas_3.0 (GCF_000002335.2) LG4 NC_007419.1 (5778635..5780670, complement)

    Linkage Group LG4 - NC_007419.2Genomic Context describing neighboring genes Neighboring gene paired box protein Pax-6 Neighboring gene uncharacterized LOC107397837 Neighboring gene torso-like protein Neighboring gene ubiquitin-like protein 3 Neighboring gene zinc finger protein OZF Neighboring gene 60S ribosomal protein L9

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    tetratricopeptide repeat protein 5
    Names
    AUGUSTUS-3.0.2_07407
    GLEAN_07407
    Tetratricopeptide repeat protein 5-like Protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Tribolium castaneum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tcas5.2 Primary Assembly

    Genomic

    1. NC_007419.2 Reference Tcas5.2 Primary Assembly

      Range
      4959577..4961808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_969639.4XP_974732.3  tetratricopeptide repeat protein 5

      See identical proteins and their annotated locations for XP_974732.3

      UniProtKB/TrEMBL
      D1ZZR8
      Conserved Domains (4) summary
      sd00006
      Location:107136
      TPR; TPR repeat [structural motif]
      pfam04949
      Location:238302
      Transcrip_act; Transcriptional activator
      pfam13414
      Location:109181
      TPR_11; TPR repeat
      pfam16669
      Location:322433
      TTC5_OB; Tetratricopeptide repeat protein 5 OB fold domain