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    LOC661810 hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 661810, updated on 2-Apr-2025
    Gene symbol
    LOC661810
    Gene description
    hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
    Locus tag
    TcasGA2_TC005769
    See related
    EnsemblRapid:LOC661810
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    all
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    See LOC661810 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 6 NC_087399.1 (6500143..6503109)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG8 NC_007423.3 (7913609..7916506, complement)

    Chromosome 6 - NC_087399.1Genomic Context describing neighboring genes Neighboring gene mutS protein homolog 4 Neighboring gene UbiA prenyltransferase domain-containing heix Neighboring gene meiotic nuclear division protein 1 homolog Neighboring gene Transcription factor B5 Neighboring gene Inositol phosphate kinase 2 Neighboring gene serpin peptidase inhibitor 23

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-hydroxyacyl-CoA dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD+ binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
    Names
    AUGUSTUS-3.0.2_05769
    GLEAN_05769
    Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial-like Protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087399.1 Reference icTriCast1.1 Primary Assembly

      Range
      6500143..6503109
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_967949.5 → XP_973042.1  hydroxyacyl-coenzyme A dehydrogenase, mitochondrial

      See identical proteins and their annotated locations for XP_973042.1

      UniProtKB/TrEMBL
      D6WWC6
      Related
      XP_973042.1, XM_967949.5
      Conserved Domains (3) summary
      COG1250
      Location:21 → 309
      FadB; 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
      pfam00725
      Location:210 → 307
      3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
      pfam02737
      Location:23 → 208
      3HCDH_N; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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