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    LOC654847 solute carrier organic anion transporter family member 4C1 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 654847, updated on 13-Feb-2021

    Summary

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    Gene symbol
    LOC654847
    Gene description
    solute carrier organic anion transporter family member 4C1
    Locus tag
    TcasGA2_TC004684
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC654847 in Genome Data Viewer
    Location:
    chromosome: LGX
    Exon count:
    9
    Annotation release Status Assembly LG Location
    103 current Tcas5.2 (GCF_000002335.3) LGX NC_007416.3 (229772..247766)
    102 previous assembly Tcas_3.0 (GCF_000002335.2) LG1=X NC_007416.2 (7559..25559, complement)

    Linkage Group LGX - NC_007416.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 423 homolog Neighboring gene uncharacterized LOC654960 Neighboring gene exocyst complex component 2 Neighboring gene uncharacterized LOC107397700 Neighboring gene putative glycine-rich cell wall structural protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 4C1
    Names
    AUGUSTUS-3.0.2_34513
    GLEAN_04684
    Solute carrier organic anion transporter family member 4C1-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tribolium castaneum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tcas5.2 Primary Assembly

    Genomic

    1. NC_007416.3 Reference Tcas5.2 Primary Assembly

      Range
      229772..247766
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015977506.1 → XP_015832992.1  LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 4C1

      Conserved Domains (4) summary
      cd06174
      Location:252 → 495
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd01330
      Location:507 → 558
      KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
      sd00031
      Location:661 → 684
      LRR_1; leucine-rich repeat [structural motif]
      pfam03137
      Location:88 → 656
      OATP; Organic Anion Transporter Polypeptide (OATP) family
    Nucleotide Protein Strain
    Heading Accession and Version

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