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    LOC656420 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 656420, updated on 13-Feb-2021

    Summary

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    Gene symbol
    LOC656420
    Gene description
    delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
    Locus tag
    TcasGA2_TC003878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC656420 in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    8
    Annotation release Status Assembly LG Location
    103 current Tcas5.2 (GCF_000002335.3) LG3 NC_007418.3 (25637813..25647112)
    102 previous assembly Tcas_3.0 (GCF_000002335.2) LG3 NC_007418.2 (30730472..30739769)

    Linkage Group LG3 - NC_007418.3Genomic Context describing neighboring genes Neighboring gene chitinase 6 Neighboring gene probable RNA 3'-terminal phosphate cyclase-like protein Neighboring gene EF-hand calcium-binding domain-containing protein 2 Neighboring gene protein GPR107 Neighboring gene glycosyltransferase-like domain-containing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
    Names
    AUGUSTUS-3.0.2_03878
    Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like Protein
    GLEAN_03878

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tribolium castaneum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tcas5.2 Primary Assembly

    Genomic

    1. NC_007418.3 Reference Tcas5.2 Primary Assembly

      Range
      25637813..25647112
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_962953.4 → XP_968046.3  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      D6WH44
      Conserved Domains (1) summary
      cl23717
      Location:38 → 304
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    2. XM_008193173.2 → XP_008191395.1  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X2

      See identical proteins and their annotated locations for XP_008191395.1

      Conserved Domains (1) summary
      cl23717
      Location:6 → 272
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    Nucleotide Protein Strain
    Heading Accession and Version

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