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    LOC657641 SET and MYND domain-containing protein 4 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657641, updated on 2-Apr-2025
    Gene symbol
    LOC657641
    Gene description
    SET and MYND domain-containing protein 4
    Locus tag
    TcasGA2_TC003856
    See related
    EnsemblRapid:LOC657641
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    all
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    See LOC657641 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (11410652..11423814, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (23318802..23332429)

    Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene Galactose-1-phosphate uridylyltransferase Neighboring gene UDP-glucosyltransferase 2 Neighboring gene uncharacterized LOC135267929 Neighboring gene UDP-glycosyltransferase UGT5 Neighboring gene uncharacterized LOC135267930 Neighboring gene uncharacterized LOC107397632 Neighboring gene phospholipase A2A Neighboring gene uncharacterized LOC135265305 Neighboring gene translation elongation factor EF-1alpha (GTPase) HBS1

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    SET and MYND domain-containing protein 4
    Names
    AUGUSTUS-3.0.2_03856
    GLEAN_03856
    SET and MYND domain-containing protein 4-like Protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

      Range
      11410652..11423814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964088.4 → XP_969181.3  SET and MYND domain-containing protein 4

      UniProtKB/TrEMBL
      D6WFW8
      Related
      XP_969181.3, XM_964088.4
    Nucleotide Protein Strain
    Heading Accession and Version

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