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    iPLA2-VIA calcium-independent phospholipase A2 VIA [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 659843, updated on 2-Apr-2025
    Gene symbol
    iPLA2-VIA
    Gene description
    calcium-independent phospholipase A2 VIA
    Locus tag
    TcasGA2_TC003390
    See related
    EnsemblRapid:GeneID_659843
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    See iPLA2-VIA in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (32528281..32540462)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (4036072..4045391, complement)

    Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC659571 Neighboring gene gamma-glutamyl hydrolase Neighboring gene pentatricopeptide repeat-containing protein 1, mitochondrial Neighboring gene eukaryotic translation initiation factor 3 subunit l Neighboring gene uncharacterized LOC103313821 Neighboring gene mitochondrial inner membrane protease ATP23 homolog Neighboring gene midkine and pleiotrophin 1 Neighboring gene Cyclin-dependent kinase 9

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-independent phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    85/88 kDa calcium-independent phospholipase A2
    Names
    85/88 kDa calcium-independent phospholipase A2-like Protein
    AUGUSTUS-3.0.2_03390
    GLEAN_03390

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

      Range
      32528281..32540462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064359789.1 → XP_064215859.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

      Related
      XP_064215859.1, XM_064359789.1

    2. XM_015977646.2 → XP_015833132.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

      Related
      XP_015833132.1, XM_015977646.2
      Conserved Domains (4) summary
      cd07212
      Location:506 → 816
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      cd00204
      Location:255 → 405
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:326 → 415
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:321 → 349
      ANK; ANK repeat [structural motif]

    3. XM_064359790.1 → XP_064215860.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

      Related
      XP_064215860.1, XM_064359790.1

    4. XM_008198000.3 → XP_008196222.1  85/88 kDa calcium-independent phospholipase A2 isoform X4

      Related
      XP_008196222.1, XM_008198000.3
      Conserved Domains (4) summary
      cd07212
      Location:470 → 780
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      cd00204
      Location:219 → 369
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:290 → 379
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:285 → 313
      ANK; ANK repeat [structural motif]

    5. XM_966111.5 → XP_971204.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

      UniProtKB/TrEMBL
      D6WG42
      Related
      XP_971204.1, XM_966111.5
      Conserved Domains (4) summary
      cd07212
      Location:471 → 781
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      cd00204
      Location:220 → 370
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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